gaston

CRANgastonMaRDI QIDQ60935FDOQ60935

Genetic Data Handling (QC, GRM, LD, PCA) & Linear Mixed Models

Claire Dandine-Roulland, Hervé Perdry

Last update: 7 December 2023

Copyright license: GNU General Public License, version 3.0

Software version identifier: 1.5.9, 1.0, 1.1, 1.2, 1.3.1, 1.4.5, 1.4.6, 1.4.7, 1.4.8, 1.4.9, 1.4, 1.5.2, 1.5.3, 1.5.4, 1.5.5, 1.5.6, 1.5.7, 1.5.8, 1.5, 1.6

Description

Manipulation of genetic data (SNPs). Computation of GRM and dominance matrix, LD, heritability with efficient algorithms for linear mixed model (AIREML). Dandine et al <doi:10.1159/000488519>.

Cites work

• 46th European Mathematical Genetics Meeting (EMGM) 2018, Cagliari, Italy, April 18-20, 2018: Abstracts

Cited In (7)

• hierfstat
• Ravages
• snpsettest
• RAINBOWR
• rNeighborGWAS
• rNeighborQTL
• milorGWAS

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