PRECAST (Q62564)

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Embedding and Clustering with Alignment for Spatial Datasets
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PRECAST
Embedding and Clustering with Alignment for Spatial Datasets

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    1.5
    23 March 2023
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    1.6
    18 April 2023
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    1.0
    22 June 2022
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    1.1
    29 June 2022
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    1.2
    12 July 2022
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    1.3
    18 October 2022
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    1.4
    11 February 2023
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    1.6.2
    9 August 2023
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    1.6.3
    6 November 2023
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    1.6.4
    25 January 2024
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    25 January 2024
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    An efficient data integration method is provided for multiple spatial transcriptomics data with non-cluster-relevant effects such as the complex batch effects. It unifies spatial factor analysis simultaneously with spatial clustering and embedding alignment, requiring only partially shared cell/domain clusters across datasets. More details can be referred to Wei Liu, et al. (2023) <doi:10.1038/s41467-023-35947-w>.
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