PRECAST
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Software:62564
Embedding and Clustering with Alignment for Spatial Datasets
Last update: 25 January 2024
Copyright license: GNU General Public License, version 3.0
Software version identifier: 1.5, 1.6, 1.0, 1.1, 1.2, 1.3, 1.4, 1.6.2, 1.6.3, 1.6.4
An efficient data integration method is provided for multiple spatial transcriptomics data with non-cluster-relevant effects such as the complex batch effects. It unifies spatial factor analysis simultaneously with spatial clustering and embedding alignment, requiring only partially shared cell/domain clusters across datasets. More details can be referred to Wei Liu, et al. (2023) <doi:10.1038/s41467-023-35947-w>.
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