The following pages link to Bioinformatics (Q58720):
Displaying 50 items.
- Permutation importance: a corrected feature importance measure (Q58725) (← links)
- Gene set enrichment for reproducible science: comparison of CERNO and eight other algorithms (Q59689) (← links)
- iq: an R package to estimate relative protein abundances from ion quantification in DIA-MS-based proteomics (Q60347) (← links)
- Efficient analysis of large-scale genome-wide data with two R packages: bigstatsr and bigsnpr (Q60680) (← links)
- corto: a lightweight R package for gene network inference and master regulator analysis (Q60690) (← links)
- MissForest--non-parametric missing value imputation for mixed-type data (Q62089) (← links)
- clustermq enables efficient parallelization of genomic analyses (Q62369) (← links)
- Proline: an efficient and user-friendly software suite for large-scale proteomics (Q62776) (← links)
- Parallelized prediction error estimation for evaluation of high-dimensional models (Q63244) (← links)
- GEOquery: a bridge between the Gene Expression Omnibus (GEO) and BioConductor (Q63377) (← links)
- Importing ArrayExpress datasets into R/Bioconductor (Q63385) (← links)
- MultiQC: summarize analysis results for multiple tools and samples in a single report (Q63419) (← links)
- lgpr: an interpretable non-parametric method for inferring covariate effects from longitudinal data (Q64688) (← links)
- geiger v2.0: an expanded suite of methods for fitting macroevolutionary models to phylogenetic trees (Q65505) (← links)
- polymapR—linkage analysis and genetic map construction from F1 populations of outcrossing polyploids (Q69932) (← links)
- On the beta-binomial model for analysis of spectral count data in label-free tandem mass spectrometry-based proteomics (Q70875) (← links)
- An accurate paired sample test for count data (Q70876) (← links)
- Efficient computation of contributional diversity metrics from microbiome data with FuncDiv (Q71321) (← links)
- protr/ProtrWeb: R package and web server for generating various numerical representation schemes of protein sequences (Q72261) (← links)
- Conditional canonical correlation estimation based on covariates with random forests (Q72280) (← links)
- nandb—number and brightness in R with a novel automatic detrending algorithm (Q72305) (← links)
- DiNAMIC: a method to identify recurrent DNA copy number aberrations in tumors (Q72643) (← links)
- DiNAMIC.Duo: detecting somatic DNA copy number differences without a normal reference (Q72650) (← links)
- Efficient comparative phylogenetics on large trees (Q72826) (← links)
- KODAMA: an R package for knowledge discovery and data mining (Q73274) (← links)
- BoolNet—an R package for generation, reconstruction and analysis of Boolean networks (Q73407) (← links)
- Dissecting newly transcribed and old RNA using GRAND-SLAM (Q73477) (← links)
- Information theoretic generalized Robinson–Foulds metrics for comparing phylogenetic trees (Q74705) (← links)
- A novel algorithm and web-based tool for comparing two alternative phylogenetic trees (Q74713) (← links)
- Testing microbiome association using integrated quantile regression models (Q75176) (← links)
- RAbHIT: R Antibody Haplotype Inference Tool (Q77338) (← links)
- adegenet: a R package for the multivariate analysis of genetic markers (Q78894) (← links)
- Generating samples under a Wright–Fisher neutral model of genetic variation (Q80037) (← links)
- Seq-Gen: an application for the Monte Carlo simulation of DNA sequence evolution along phylogenetic trees (Q80040) (← links)
- PAML: a program package for phylogenetic analysis by maximum likelihood (Q80044) (← links)
- R/qtl: QTL mapping in experimental crosses (Q82592) (← links)
- Accurate and efficient cell lineage tree inference from noisy single cell data: the maximum likelihood perfect phylogeny approach (Q83045) (← links)
- Coala: an R framework for coalescent simulation (Q83157) (← links)
- EBglmnet: a comprehensive R package for sparse generalized linear regression models (Q83553) (← links)
- scGate: marker-based purification of cell types from heterogeneous single-cell RNA-seq datasets (Q84426) (← links)
- Evaluating statistical approaches to leverage large clinical datasets for uncovering therapeutic and adverse medication effects (Q84486) (← links)
- LDlink: a web-based application for exploring population-specific haplotype structure and linking correlated alleles of possible functional variants (Q85010) (← links)
- Integrating phylogenetic and functional data in microbiome studies (Q85335) (← links)
- SNPassoc: an R package to perform whole genome association studies (Q85385) (← links)
- MSCquartets 1.0: quartet methods for species trees and networks under the multispecies coalescent model in R (Q85628) (← links)
- purgeR: inbreeding and purging in pedigreed populations (Q85912) (← links)
- selectBoost: a general algorithm to enhance the performance of variable selection methods (Q86714) (← links)
- Cascade: a R package to study, predict and simulate the diffusion of a signal through a temporal gene network (Q86715) (← links)
- Deviance residuals-based sparse PLS and sparse kernel PLS regression for censored data (Q86962) (← links)
- Efficient weighted univariate clustering maps outstanding dysregulated genomic zones in human cancers (Q87005) (← links)
