Stable Computation of Probability Densities for Metastable Dynamical Systems
aggregation/disaggregationalgorithmbiomolecular examplescluster analysisdomain decompositiondynamical systemseigenvectorHamiltonian systemill-conditioned problemmetastabilitymolecular conformationsnumerical examplessamplingtransition probability matrix
Stability theory for smooth dynamical systems (37C75) Discretization methods and integrators (symplectic, variational, geometric, etc.) for dynamical systems (37M15) Classification and discrimination; cluster analysis (statistical aspects) (62H30) Numerical computation of eigenvalues and eigenvectors of matrices (65F15) Numerical methods for Hamiltonian systems including symplectic integrators (65P10)
- Computation of equilibrium densities in metastable dynamical systems by domain decomposition
- Approximating invariant densities of metastable systems
- Metastability of Diffusion Processes
- An SVD approach to identifying metastable states of Markov chains
- Comparisons Between Aggregation/Disaggregation and a Direct Algorithm for Computing the Stationary Probabilities of a Markov Chain
- Course 7 Computing the number of metastable states in infinite-range models
- Computation of equilibrium densities in metastable dynamical systems by domain decomposition
- \textsf{ZIBgridfree}: efficient conformational analysis by partition-of-unity coupling
- Efficient Computation of Extreme Excursion Probabilities for Dynamical Systems through Rice's Formula
- Identifying almost invariant sets in stochastic dynamical systems
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