| Publication | Date of Publication | Type |
|---|
| Towards a FAIR documentation of workflows and models in applied mathematics | 2024-11-13 | Paper |
Research-data management planning in the German mathematical community
European Mathematical Society Magazine | 2024-02-19 | Paper |
Learning Koopman eigenfunctions of stochastic diffusions with optimal importance sampling and ISOKANN
Journal of Mathematical Physics | 2024-02-07 | Paper |
Augmented ant colony algorithm for virtual drug discovery
Journal of Mathematical Chemistry | 2024-01-29 | Paper |
A review of Girsanov reweighting and of square root approximation for building molecular Markov state models
Journal of Mathematical Physics | 2023-03-29 | Paper |
Modelling altered signalling of G‑protein coupled receptors in inflamed environment to advance drug design
Nature | 2023-01-12 | Paper |
| Coding Reliability with Aclus -- Did I correctly characterize my observations? | 2022-07-06 | Paper |
| The Mathematics of Comparing Objects | 2022-01-14 | Paper |
Estimation of the Koopman Generator by Newton's Extrapolation
Multiscale Modeling & Simulation | 2021-06-08 | Paper |
Analyzing Raman spectral data without separabiliy assumption
Journal of Mathematical Chemistry | 2021-05-10 | Paper |
Computing the minimal rebinding effect for nonreversible processes
Multiscale Modeling & Simulation | 2021-04-08 | Paper |
Analyzing Raman spectral data without separabiliy assumption
Journal of Mathematical Chemistry | 2021-01-01 | Paper |
| The Augmented Jump Chain -- a sparse representation of time-dependent Markov jump processes | 2020-08-11 | Paper |
| A novel *R-based perspective on solving ordinary differential equations | 2020-06-15 | Paper |
Spectral clustering for non-reversible Markov chains
Computational and Applied Mathematics | 2019-01-29 | Paper |
Mixed-integer programming for cycle detection in nonreversible Markov processes
Multiscale Modeling & Simulation | 2018-05-29 | Paper |
An automatic adaptive importance sampling algorithm for molecular dynamics in reaction coordinates
SIAM Journal on Scientific Computing | 2018-03-14 | Paper |
Importance sampling in path space for diffusion processes with slow-fast variables
Zeitschrift für Wahrscheinlichkeitstheorie und Verwandte Gebiete | 2018-02-12 | Paper |
Finding metastabilities in reversible Markov chains based on incomplete sampling
Special Matrices | 2017-11-08 | Paper |
| A fuzzy-set theoretical framework for computing exit rates of rare events in potential-driven diffusion processes | 2017-08-02 | Paper |
Finding dominant structures of nonreversible Markov processes
Multiscale Modeling & Simulation | 2016-12-13 | Paper |
Computing the nearest reversible Markov chain.
Numerical Linear Algebra with Applications | 2016-02-01 | Paper |
Computing the Minimal Rebinding Effect Included in a Given Kinetics
Multiscale Modeling & Simulation | 2015-05-19 | Paper |
Applications of the cross-entropy method to importance sampling and optimal control of diffusions
SIAM Journal on Scientific Computing | 2015-03-02 | Paper |
\textsf{ZIBgridfree}: efficient conformational analysis by partition-of-unity coupling
Journal of Mathematical Chemistry | 2014-10-09 | Paper |
A square root approximation of transition rates for a Markov state model
SIAM Journal on Matrix Analysis and Applications | 2013-09-26 | Paper |
Fuzzy spectral clustering by PCCA+: application to Markov state models and data classification
Advances in Data Analysis and Classification. ADAC | 2013-07-18 | Paper |
A meshless discretization method for Markov state models applied to explicit water peptide folding simulations
Meshfree Methods for Partial Differential Equations VI | 2013-07-09 | Paper |
A coarse graining method for the dimension reduction of the state space of biomolecules
Journal of Mathematical Chemistry | 2013-01-11 | Paper |
| Computation of equilibrium densities in metastable dynamical systems by domain decomposition | 2009-04-21 | Paper |
Monte Carlo sampling of Wigner functions and surface hopping quantum dynamics
Journal of Computational Physics | 2009-04-03 | Paper |
Stable Computation of Probability Densities for Metastable Dynamical Systems
Multiscale Modeling & Simulation | 2008-06-10 | Paper |
| Meshless methods in conformation dynamics | 2006-11-23 | Paper |
Robust Perron cluster analysis in conformation dynamics
Linear Algebra and its Applications | 2005-05-04 | Paper |
The ISL View4You broadcast news transcription system
International Journal of Speech Technology | 2002-04-02 | Paper |
