Steady state analysis of Boolean models: a dimension reduction approach

DOI10.1016/B978-0-12-801213-0.00006-XMaRDI QIDQ2811732zbMATH OpenOpenAlexFDO

Authors Alan Veliz-Cuba, David Murrugarra

Publication date 10 June 2016

Published in Algebraic and Discrete Mathematical Methods for Modern Biology (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/b978-0-12-801213-0.00006-x

zbMATH Keywords

steady stateBoolean modelfixed pointsmodel reductionpolynomial algebra

Mathematics Subject Classification ID

General biology and biomathematics (92B05)

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Cited in

(11)

• Identification of all steady states in large networks by logical analysis
• Graph representations of monotonic Boolean model pools
• An extension of ERODE to reduce Boolean networks by backward Boolean equivalence
• Context-Sensitive Probabilistic Boolean Networks: Steady-State Properties, Reduction, and Steady-State Approximation
• Relating bisimulations with attractors in Boolean network models
• Dimension reduction of large sparse AND-NOT network models
• A reduction method for Boolean network models proven to conserve attractors
• Fitting Boolean networks from steady state perturbation data
• Symmetrizable Boolean networks
• Reduction of Boolean network models
• Dimensionality reduction of bistable biological systems

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