| Publication | Date of Publication | Type |
|---|
Modular Construction of Boolean Networks
(available as arXiv preprint) | N/A | Paper |
Modular control of Boolean network models
Bulletin of Mathematical Biology | 2025-07-28 | Paper |
Algebraic network reconstruction of discrete dynamical systems
Advances in Applied Mathematics | 2024-10-09 | Paper |
Modular construction of Boolean networks
Physica D | 2024-09-06 | Paper |
A Unified Approach to Reverse Engineering and Data Selection for Unique Network Identification
SIAM Journal on Applied Dynamical Systems | 2024-02-12 | Paper |
Primary decomposition of squarefree pseudomonomial ideals
The Journal of Software for Algebra and Geometry | 2023-06-26 | Paper |
| Algebraic network reconstruction of discrete dynamical systems | 2022-12-05 | Paper |
| Algebraic Experimental Design: Theory and Computation | 2022-08-04 | Paper |
| Decomposition of Boolean networks: An approach to modularity of biological systems | 2022-06-08 | Paper |
Decomposition of Boolean networks: An approach to modularity of biological systems
(available as arXiv preprint) | 2022-01-01 | Paper |
The number of fixed points of AND-OR networks with chain topology
Involve | 2019-10-10 | Paper |
Evidence accumulation and change rate inference in dynamic environments
Neural Computation | 2019-06-06 | Paper |
Analysis of combinatorial neural codes: an algebraic approach
Algebraic and Combinatorial Computational Biology | 2019-03-11 | Paper |
Dynamics of semilattice networks with strongly connected dependency graph
Automatica | 2019-02-05 | Paper |
| Performance of normative and approximate evidence accumulation on the dynamic clicks task | 2019-02-04 | Paper |
Performance of normative and approximate evidence accumulation on the dynamic clicks task
(available as arXiv preprint) | 2019-01-01 | Paper |
Reduction of Boolean network models
Journal of Theoretical Biology | 2018-09-24 | Paper |
Networks that learn the precise timing of event sequences
Journal of Computational Neuroscience | 2018-03-14 | Paper |
Dimension reduction of large sparse AND-NOT network models
(available as arXiv preprint) | 2016-12-16 | Paper |
Steady state analysis of Boolean models: a dimension reduction approach
Algebraic and Discrete Mathematical Methods for Modern Biology | 2016-06-10 | Paper |
Stochastic models of evidence accumulation in changing environments
SIAM Review | 2016-05-10 | Paper |
Piecewise linear and Boolean models of chemical reaction networks
Bulletin of Mathematical Biology | 2015-02-06 | Paper |
Piecewise linear and Boolean models of chemical reaction networks
Bulletin of Mathematical Biology | 2015-02-06 | Paper |
Structure and dynamics of acyclic networks
Discrete Event Dynamic Systems | 2014-12-12 | Paper |
On the computation of fixed points in Boolean networks
Journal of Applied Mathematics and Computing | 2014-08-05 | Paper |
Algebraic Models and Their Use in Systems Biology
Discrete and Topological Models in Molecular Biology | 2014-06-23 | Paper |
The neural ring: an algebraic tool for analyzing the intrinsic structure of neural codes
Bulletin of Mathematical Biology | 2013-10-11 | Paper |
The neural ring: an algebraic tool for analyzing the intrinsic structure of neural codes
Bulletin of Mathematical Biology | 2013-10-11 | Paper |
AND-NOT logic framework for steady state analysis of Boolean network models
Applied Mathematics & Information Sciences | 2013-08-08 | Paper |
On the relationship of steady states of continuous and discrete models arising from biology
Bulletin of Mathematical Biology | 2013-02-06 | Paper |
An algebraic approach to reverse engineering finite dynamical systems arising from biology
SIAM Journal on Applied Dynamical Systems | 2012-04-19 | Paper |
| ADAM: Analysis of Discrete Models of Biological Systems Using Computer Algebra | 2010-12-03 | Paper |
The dynamics of conjunctive and disjunctive Boolean network models
Bulletin of Mathematical Biology | 2010-10-26 | Paper |
ADAM: Analysis of Discrete Models of Biological Systems Using Computer Algebra
(available as arXiv preprint) | 2010-01-01 | Paper |
