Synthesizing small and reliable tile sets for patterned DNA self-assembly

DOI10.1007/978-3-642-23638-9_13MaRDI QIDQ3092339zbMATH OpenOpenAlexDBLPWikidataFDO

Authors Tuomo Lempiäinen, Eugen Czeizler, Pekka Orponen

Publication date 16 September 2011

Published in Lecture Notes in Computer Science (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1007/978-3-642-23638-9_13

Mathematics Subject Classification ID

Modes of computation (nondeterministic, parallel, interactive, probabilistic, etc.) (68Q10) Protein sequences, DNA sequences (92D20)

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Cites work

• Algorithm portfolios
• scientific article; zbMATH DE number 1890628 (Why is no real title available?)
• Optimal speedup of Las Vegas algorithms
• Synthesizing Minimal Tile Sets for Patterned DNA Self-assembly
• The program-size complexity of self-assembled squares (extended abstract)

Cited in

(11)

• On stoichiometry for the assembly of flexible tile DNA complexes
• An introduction to tile-based self-assembly and a survey of recent results
• Programming Self-Assembly of DNA Tiles
• Synthesizing Minimal Tile Sets for Patterned DNA Self-assembly
• Synthesizing minimal tile sets for complex patterns in the framework of patterned DNA self-assembly
• Search methods for tile sets in patterned DNA self-assembly
• Tile-Based DNA Nanostructures
• Optimization of supply diversity for the self-assembly of simple objects in two and three dimensions
• Design automation of polyomino set that self-assembles into a desired shape
• Tile-based modeling of DNA self-assembly for two graph families with appended paths
• Self-assembly of patterns in the abstract tile assembly model

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Uses Software

• Smodels

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