Towards optimization of PCR protocol in DNA computing

DOI10.1007/3-540-48017-X_2MaRDI QIDQ4737626zbMATH OpenFDO

Authors Satoshi Kashiwamura, Masashi Nakatsugawa, Masahito Yamamoto, Toshikazu Shiba, Azuma Ohuchi

Publication date 11 August 2004

Published in Lecture Notes in Computer Science (Search for Journal in Brave)

Full work available at URL http://link.springer.de/link/service/series/0558/bibs/2340/23400014.htm

Mathematics Subject Classification ID

Modes of computation (nondeterministic, parallel, interactive, probabilistic, etc.) (68Q10) Protein sequences, DNA sequences (92D20)

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(6)

• DNA-templated synthesis optimization
• Comparison of different methods to analyze a DNA computing library using the polymerase chain reaction
• An analysis of computational efficiency of DNA computing
• Application of orthogonal designs to optimize PCR conditions
• Displacement Whiplash PCR: Optimized Architecture and Experimental Validation
• DNA-templated synthesis optimization

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