Transformations to simplify phylogenetic networks

DOI10.1007/S11538-024-01398-7MaRDI QIDQ6661669zbMATH OpenFDO

Authors Johanna Heiss, D. Huson, Mike Steel

Publication date 13 January 2025

Published in Bulletin of Mathematical Biology (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1007/S11538-024-01398-7

zbMATH Keywords

lowest stable ancestorphylogenetic networkstransformationstrees

Mathematics Subject Classification ID

Biology and other natural sciences (92-XX)

Recommendations

• Phylogenetic networks
• Phylogenetic networks from multi-labelled trees
• Phylogenetic Networks: Properties and Relationship to Trees and Clusters
• Computational Science – ICCS 2005
• Modelling reticulate evolution

Cites work

• Classes of explicit phylogenetic networks and their biological and mathematical significance
• Extension operations on sets of leaf-labelled trees
• Hierarchies from lowest stable ancestors in nonbinary phylogenetic networks
• Merging arcs to produce acyclic phylogenetic networks and normal networks
• Phylogeny. Discrete and random processes in evolution
• ReCombinatorics. The algorithmics of ancestral recombination graphs and explicit phylogenetic networks. With contributions from Charles H. Langley, Yun S. Song and Yufeng Wu
• Trinets encode orchard phylogenetic networks

Cited in

(2)

• Characterizing and transforming DAGs within the \(\mathfrak{I}\)-lca framework
• Simplifying and characterizing DAGs and phylogenetic networks via least common ancestor constraints

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