Using enriched ontology structure for improving statistical models of gene annotation sets

DOI10.1007/978-3-642-14058-7_6MaRDI QIDQ3164079zbMATH OpenOpenAlexFDO

Authors Frank Rügheimer

Publication date 27 October 2010

Published in Communications in Computer and Information Science (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1007/978-3-642-14058-7_6

zbMATH Keywords

Gene Ontologystatistical analysis of annotationsstatistical information

Mathematics Subject Classification ID

Data structures (68P05) Database theory (68P15) Genetics and epigenetics (92D10)

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(6)

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• TreeHugger: a new test for enrichment of gene ontology terms
• An Improved Statistic for Detecting Over-Represented Gene Ontology Annotations in Gene Sets
• Functional Classification of Genes Using Non-Negative Independent Component Analysis
• Supervised gene function prediction using spectral clustering on gene co-expression networks
• Evaluation of the vector space representation in text-based gene clustering

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