Using long-range contact number information for protein secondary structure prediction

DOI10.1142/S1793524514500521MaRDI QIDQ2933550zbMATH OpenFDO

Authors Yonge Feng, Liao Fu Luo

Publication date 3 December 2014

Published in International Journal of Biomathematics (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1142/S1793524514500521

zbMATH Keywords

increment of diversitylong-range contactprotein secondary structurequadratic discriminant analysistetra-peptide structural words

Mathematics Subject Classification ID

Protein sequences, DNA sequences (92D20)

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Cites work

• Predicting ion channels and their types by the dipeptide mode of pseudo amino acid composition
• The modified Mahalanobis discriminant for predicting outer membrane proteins by using Chou's pseudo amino acid composition

Cited in

(4)

• Novel scales based on hydrophobicity indices for secondary protein structure
• Hepatitis C virus contact map prediction based on binary encoding strategy
• CSSP2: an improved method for predicting contact-dependent secondary structure propensity
• A method for protein accessibility prediction based on residue types and conformational states

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