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7 April 2023
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Property / author
 
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3.0
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3.7
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3.9
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8.2
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Property / description
 
Integrate sequencing data (Variant call format, e.g. VCF or BCF) or meta-analysis results in R. This package can help you (1) read VCF/BCF/BGEN files by chromosomal ranges (e.g. 1:100-200); (2) read RareMETAL summary statistics files; (3) read tables from a tabix-indexed files; (4) annotate VCF/BCF files; (5) create customized workflow based on Makefile.
Property / description: Integrate sequencing data (Variant call format, e.g. VCF or BCF) or meta-analysis results in R. This package can help you (1) read VCF/BCF/BGEN files by chromosomal ranges (e.g. 1:100-200); (2) read RareMETAL summary statistics files; (3) read tables from a tabix-indexed files; (4) annotate VCF/BCF files; (5) create customized workflow based on Makefile. / rank
 
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Property / author
 
Property / author: Xiaowei Zhan / rank
 
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Property / author: Dajiang Liu / rank
 
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Property / copyright license
 
Property / copyright license: GNU General Public License, version 2.0 / rank
 
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Property / copyright license: GNU General Public License, version 3.0 / rank
 
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Property / copyright license: File License / rank
 
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point in time: 9 February 2024
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links / mardi / namelinks / mardi / name
 

Latest revision as of 19:22, 21 March 2024

Efficiently Read Sequence Data (VCF Format, BCF Format, METAL Format and BGEN Format) into R
Language Label Description Also known as
English
seqminer
Efficiently Read Sequence Data (VCF Format, BCF Format, METAL Format and BGEN Format) into R

    Statements

    swMATH work ID
    19681
    0 references
    instance of
    R package
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    software version identifier
    8.9
    publication date
    7 April 2023
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    0.1
    publication date
    20 March 2013
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    0.2
    publication date
    1 April 2013
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    0.3
    publication date
    13 April 2013
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    0.5
    publication date
    28 May 2013
    0 references
    0.7
    publication date
    29 July 2013
    0 references
    1.0
    publication date
    4 September 2013
    0 references
    1.3
    publication date
    26 September 2013
    0 references
    1.4
    publication date
    29 September 2013
    0 references
    1.9.1
    publication date
    15 November 2013
    0 references
    1.9
    publication date
    11 November 2013
    0 references
    2.0
    publication date
    20 November 2013
    0 references
    2.2
    publication date
    27 January 2014
    0 references
    2.7
    publication date
    14 April 2014
    0 references
    3.0
    publication date
    19 April 2014
    0 references
    3.1
    publication date
    7 May 2014
    0 references
    3.4
    publication date
    8 December 2014
    0 references
    3.7
    publication date
    16 May 2015
    0 references
    3.9
    publication date
    21 May 2015
    0 references
    4.2
    publication date
    10 June 2015
    0 references
    4.5
    publication date
    29 June 2015
    0 references
    4.7
    publication date
    19 August 2015
    0 references
    4.9
    publication date
    16 September 2015
    0 references
    5.0
    publication date
    22 October 2015
    0 references
    5.2
    publication date
    3 May 2016
    0 references
    5.3
    publication date
    7 May 2016
    0 references
    5.7
    publication date
    13 January 2017
    0 references
    5.9
    publication date
    18 April 2017
    0 references
    6.0
    publication date
    5 May 2017
    0 references
    6.1
    publication date
    2 August 2018
    0 references
    6.7
    publication date
    6 December 2018
    0 references
    7.0
    publication date
    7 January 2019
    0 references
    7.1
    publication date
    8 January 2019
    0 references
    8.0
    publication date
    2 March 2020
    0 references
    8.2
    publication date
    9 November 2021
    0 references
    8.4
    publication date
    7 February 2022
    0 references
    8.5
    publication date
    15 November 2022
    0 references
    8.6
    publication date
    26 January 2023
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    9.1
    publication date
    2 September 2023
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    9.3
    publication date
    28 November 2023
    0 references
    9.4
    publication date
    3 February 2024
    0 references
    CRAN project
    seqminer
    0 references
    programmed in
    R
    0 references
    last update
    3 February 2024
    0 references
    description
    Integrate sequencing data (Variant call format, e.g. VCF or BCF) or meta-analysis results in R. This package can help you (1) read VCF/BCF/BGEN files by chromosomal ranges (e.g. 1:100-200); (2) read RareMETAL summary statistics files; (3) read tables from a tabix-indexed files; (4) annotate VCF/BCF files; (5) create customized workflow based on Makefile.
    0 references
    author
    Xiaowei Zhan
    0 references
    Dajiang Liu
    0 references
     
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