mvMORPH (Q31910): Difference between revisions

@@ description / en / description / en @@
+Multivariate Comparative Tools for Fitting Evolutionary Models to Morphometric Data
@@ Property / instance of @@
+R package
@@ Property / instance of: R package / rank @@
+Normal rank
@@ Property / software version identifier @@
+.1.7
@@ Property / software version identifier: 1.1.7 / rank @@
+Normal rank
@@ Property / software version identifier: 1.1.7 / qualifier @@
+publication date: 14 March 2023Timestamp +2023-03-14T00:00:00Z
Timezone +00:00
Calendar Gregorian
Precision 1 day
Before 0
After 0
-Timestamp
++2023-03-14T00:00:00Z
-Timezone
++00:00
-Calendar
+Gregorian
-Precision
+day
 Before
 After
@@ Property / software version identifier @@
+.0.1
@@ Property / software version identifier: 1.0.1 / rank @@
+Normal rank
@@ Property / software version identifier: 1.0.1 / qualifier @@
+publication date: 7 February 2014Timestamp +2014-02-07T00:00:00Z
Timezone +00:00
Calendar Gregorian
Precision 1 day
Before 0
After 0
-Timestamp
++2014-02-07T00:00:00Z
-Timezone
++00:00
-Calendar
+Gregorian
-Precision
+day
 Before
 After
@@ Property / software version identifier @@
+.0.2
@@ Property / software version identifier: 1.0.2 / rank @@
+Normal rank
@@ Property / software version identifier: 1.0.2 / qualifier @@
+publication date: 24 April 2014Timestamp +2014-04-24T00:00:00Z
Timezone +00:00
Calendar Gregorian
Precision 1 day
Before 0
After 0
-Timestamp
++2014-04-24T00:00:00Z
-Timezone
++00:00
-Calendar
+Gregorian
-Precision
+day
 Before
 After
@@ Property / software version identifier @@
+.0.3
@@ Property / software version identifier: 1.0.3 / rank @@
+Normal rank
@@ Property / software version identifier: 1.0.3 / qualifier @@
+publication date: 17 March 2015Timestamp +2015-03-17T00:00:00Z
Timezone +00:00
Calendar Gregorian
Precision 1 day
Before 0
After 0
-Timestamp
++2015-03-17T00:00:00Z
-Timezone
++00:00
-Calendar
+Gregorian
-Precision
+day
 Before
 After
@@ Property / software version identifier @@
+.0.4
@@ Property / software version identifier: 1.0.4 / rank @@
+Normal rank
@@ Property / software version identifier: 1.0.4 / qualifier @@
+publication date: 22 March 2015Timestamp +2015-03-22T00:00:00Z
Timezone +00:00
Calendar Gregorian
Precision 1 day
Before 0
After 0
-Timestamp
++2015-03-22T00:00:00Z
-Timezone
++00:00
-Calendar
+Gregorian
-Precision
+day
 Before
 After
@@ Property / software version identifier @@
+.0.5
@@ Property / software version identifier: 1.0.5 / rank @@
+Normal rank
@@ Property / software version identifier: 1.0.5 / qualifier @@
+publication date: 4 May 2015Timestamp +2015-05-04T00:00:00Z
Timezone +00:00
Calendar Gregorian
Precision 1 day
Before 0
After 0
-Timestamp
++2015-05-04T00:00:00Z
-Timezone
++00:00
-Calendar
+Gregorian
-Precision
+day
 Before
 After
@@ Property / software version identifier @@
+.0.6
@@ Property / software version identifier: 1.0.6 / rank @@
+Normal rank
@@ Property / software version identifier: 1.0.6 / qualifier @@
+publication date: 24 August 2015Timestamp +2015-08-24T00:00:00Z
Timezone +00:00
Calendar Gregorian
Precision 1 day
Before 0
After 0
-Timestamp
++2015-08-24T00:00:00Z
-Timezone
++00:00
-Calendar
+Gregorian
-Precision
+day
 Before
 After
@@ Property / software version identifier @@
+.0.7
@@ Property / software version identifier: 1.0.7 / rank @@
+Normal rank
@@ Property / software version identifier: 1.0.7 / qualifier @@
+publication date: 18 June 2016Timestamp +2016-06-18T00:00:00Z
Timezone +00:00
Calendar Gregorian
Precision 1 day
Before 0
After 0
-Timestamp
++2016-06-18T00:00:00Z
-Timezone
++00:00
-Calendar
+Gregorian
-Precision
+day
 Before
 After
@@ Property / software version identifier @@
+.0.8
@@ Property / software version identifier: 1.0.8 / rank @@
+Normal rank
@@ Property / software version identifier: 1.0.8 / qualifier @@
+publication date: 25 October 2016Timestamp +2016-10-25T00:00:00Z
Timezone +00:00
Calendar Gregorian
Precision 1 day
Before 0
After 0
-Timestamp
++2016-10-25T00:00:00Z
-Timezone
++00:00
-Calendar
+Gregorian
-Precision
+day
 Before
 After
@@ Property / software version identifier @@
+.0.9
@@ Property / software version identifier: 1.0.9 / rank @@
+Normal rank
@@ Property / software version identifier: 1.0.9 / qualifier @@
+publication date: 8 June 2017Timestamp +2017-06-08T00:00:00Z
Timezone +00:00
Calendar Gregorian
Precision 1 day
Before 0
After 0
-Timestamp
++2017-06-08T00:00:00Z
-Timezone
++00:00
-Calendar
+Gregorian
-Precision
+day
 Before
 After
@@ Property / software version identifier @@
+.0
@@ Property / software version identifier: 1.0 / rank @@
+Normal rank
@@ Property / software version identifier: 1.0 / qualifier @@
+publication date: 8 October 2013Timestamp +2013-10-08T00:00:00Z
Timezone +00:00
Calendar Gregorian
Precision 1 day
Before 0
After 0
-Timestamp
++2013-10-08T00:00:00Z
-Timezone
++00:00
-Calendar
+Gregorian
-Precision
+day
 Before
 After
@@ Property / software version identifier @@
+.1.0
@@ Property / software version identifier: 1.1.0 / rank @@
+Normal rank
@@ Property / software version identifier: 1.1.0 / qualifier @@
+publication date: 4 August 2018Timestamp +2018-08-04T00:00:00Z
Timezone +00:00
Calendar Gregorian
Precision 1 day
Before 0
After 0
-Timestamp
++2018-08-04T00:00:00Z
-Timezone
++00:00
-Calendar
+Gregorian
-Precision
+day
 Before
 After
@@ Property / software version identifier @@
+.1.1
@@ Property / software version identifier: 1.1.1 / rank @@
+Normal rank
@@ Property / software version identifier: 1.1.1 / qualifier @@
+publication date: 9 January 2020Timestamp +2020-01-09T00:00:00Z
Timezone +00:00
Calendar Gregorian
Precision 1 day
Before 0
After 0
-Timestamp
++2020-01-09T00:00:00Z
-Timezone
++00:00
-Calendar
+Gregorian
-Precision
+day
 Before
 After
@@ Property / software version identifier @@
+.1.2
@@ Property / software version identifier: 1.1.2 / rank @@
+Normal rank
@@ Property / software version identifier: 1.1.2 / qualifier @@
+publication date: 17 April 2020Timestamp +2020-04-17T00:00:00Z
Timezone +00:00
Calendar Gregorian
Precision 1 day
Before 0
After 0
-Timestamp
++2020-04-17T00:00:00Z
-Timezone
++00:00
-Calendar
+Gregorian
-Precision
+day
 Before
 After
@@ Property / software version identifier @@
+.1.3
@@ Property / software version identifier: 1.1.3 / rank @@
+Normal rank
@@ Property / software version identifier: 1.1.3 / qualifier @@
+publication date: 12 June 2020Timestamp +2020-06-12T00:00:00Z
Timezone +00:00
Calendar Gregorian
Precision 1 day
Before 0
After 0
-Timestamp
++2020-06-12T00:00:00Z
-Timezone
++00:00
-Calendar
+Gregorian
-Precision
+day
 Before
 After
@@ Property / software version identifier @@
+.1.4
@@ Property / software version identifier: 1.1.4 / rank @@
+Normal rank
@@ Property / software version identifier: 1.1.4 / qualifier @@
+publication date: 17 March 2021Timestamp +2021-03-17T00:00:00Z
Timezone +00:00
Calendar Gregorian
Precision 1 day
Before 0
After 0
-Timestamp
++2021-03-17T00:00:00Z
-Timezone
++00:00
-Calendar
+Gregorian
-Precision
+day
 Before
 After
@@ Property / software version identifier @@
+.1.5
@@ Property / software version identifier: 1.1.5 / rank @@
+Normal rank
@@ Property / software version identifier: 1.1.5 / qualifier @@
+publication date: 3 May 2022Timestamp +2022-05-03T00:00:00Z
Timezone +00:00
Calendar Gregorian
Precision 1 day
Before 0
After 0
-Timestamp
++2022-05-03T00:00:00Z
-Timezone
++00:00
-Calendar
+Gregorian
-Precision
+day
 Before
 After
@@ Property / software version identifier @@
+.1.6
@@ Property / software version identifier: 1.1.6 / rank @@
+Normal rank
@@ Property / software version identifier: 1.1.6 / qualifier @@
+publication date: 9 May 2022Timestamp +2022-05-09T00:00:00Z
Timezone +00:00
Calendar Gregorian
Precision 1 day
Before 0
After 0
-Timestamp
++2022-05-09T00:00:00Z
-Timezone
++00:00
-Calendar
+Gregorian
-Precision
+day
 Before
 After
@@ Property / software version identifier @@
+.1.8
@@ Property / software version identifier: 1.1.8 / rank @@
+Normal rank
@@ Property / software version identifier: 1.1.8 / qualifier @@
+publication date: 29 November 2023Timestamp +2023-11-29T00:00:00Z
Timezone +00:00
Calendar Gregorian
Precision 1 day
Before 0
After 0
-Timestamp
++2023-11-29T00:00:00Z
-Timezone
++00:00
-Calendar
+Gregorian
-Precision
+day
 Before
 After
@@ Property / software version identifier @@
+.1.9
@@ Property / software version identifier: 1.1.9 / rank @@
+Normal rank
@@ Property / software version identifier: 1.1.9 / qualifier @@
+publication date: 9 December 2023Timestamp +2023-12-09T00:00:00Z
Timezone +00:00
Calendar Gregorian
Precision 1 day
Before 0
After 0
-Timestamp
++2023-12-09T00:00:00Z
-Timezone
++00:00
-Calendar
+Gregorian
-Precision
+day
 Before
 After
@@ Property / CRAN project @@
+mvMORPH
@@ Property / CRAN project: mvMORPH / rank @@
+Normal rank
@@ Property / maintained by @@
+Julien Clavel
@@ Property / maintained by: Julien Clavel / rank @@
+Normal rank
@@ Property / programmed in @@
+R
@@ Property / programmed in: R / rank @@
+Normal rank
@@ Property / last update @@
+December 2023Timestamp +2023-12-09T00:00:00Z
Timezone +00:00
Calendar Gregorian
Precision 1 day
Before 0
After 0
-Timestamp
++2023-12-09T00:00:00Z
-Timezone
++00:00
-Calendar
+Gregorian
-Precision
+day
 Before
 After
@@ Property / last update: 9 December 2023 / rank @@
+Normal rank
@@ Property / description @@
+Fits multivariate (Brownian Motion, Early Burst, ACDC, Ornstein-Uhlenbeck and Shifts) models of continuous traits evolution on trees and time series. 'mvMORPH' also proposes high-dimensional multivariate comparative tools (linear models using Generalized Least Squares and multivariate tests) based on penalized likelihood.  See    Clavel et al. (2015) <doi:10.1111/2041-210X.12420>, Clavel et al. (2019) <doi:10.1093/sysbio/syy045>, and Clavel & Morlon (2020) <doi:10.1093/sysbio/syaa010>.
+Normal rank
@@ Property / author @@
+Julien Clavel
@@ Property / author: Julien Clavel / rank @@
+Normal rank
@@ Property / copyright license @@
+GNU General Public License, version 2.0
@@ Property / copyright license: GNU General Public License, version 2.0 / rank @@
+Normal rank
@@ Property / copyright license @@
+GNU General Public License, version 3.0
@@ Property / copyright license: GNU General Public License, version 3.0 / rank @@
+Normal rank
+edition/version: expanded from: GPL (≥ 2.0) (English)
@@ Property / depends on software @@
+phytools
@@ Property / depends on software: phytools / rank @@
+Normal rank
@@ Property / depends on software @@
+ape
@@ Property / depends on software: ape / rank @@
+Normal rank
@@ Property / depends on software @@
+corpcor
@@ Property / depends on software: corpcor / rank @@
+Normal rank
@@ Property / depends on software @@
+subplex
@@ Property / depends on software: subplex / rank @@
+Normal rank
@@ Property / depends on software @@
+R
@@ Property / depends on software: R / rank @@
+Normal rank
@@ Property / depends on software: R / qualifier @@
+software version identifier: ≥ 3.5.0
@@ Property / imports @@
+stats
@@ Property / imports: stats / rank @@
+Normal rank
@@ Property / imports @@
+utils
@@ Property / imports: utils / rank @@
+Normal rank
@@ Property / imports @@
+spam
@@ Property / imports: spam / rank @@
+Normal rank
@@ Property / imports @@
+graphics
@@ Property / imports: graphics / rank @@
+Normal rank
@@ Property / imports @@
+glassoFast
@@ Property / imports: glassoFast / rank @@
+Normal rank
@@ Property / imports @@
+parallel
@@ Property / imports: parallel / rank @@
+Normal rank
@@ Property / imports @@
+pbmcapply
@@ Property / imports: pbmcapply / rank @@
+Normal rank
@@ Property / cites work @@
+mv morph : an r package for fitting multivariate evolutionary models to morphometric data
+Normal rank
@@ Property / cites work @@
+A Penalized Likelihood Framework for High-Dimensional Phylogenetic Comparative Methods and an Application to New-World Monkeys Brain Evolution
+Normal rank
@@ Property / cites work @@
+Reliable Phylogenetic Regressions for Multivariate Comparative Data: Illustration with the MANOVA and Application to the Effect of Diet on Mandible Morphology in Phyllostomid Bats
+Normal rank
@@ Property / MaRDI profile type @@
+MaRDI software profile
@@ Property / MaRDI profile type: MaRDI software profile / rank @@
+Normal rank
@@ Property / source code repository @@
+https://github.com/cran/mvMORPH
@@ Property / source code repository: https://github.com/cran/mvMORPH / rank @@
+Normal rank
@@ Property / Software Heritage ID @@
+swh:1:snp:9d2dd358a80f0275b630639200b117303f4a7c52
+Normal rank
+source code repository: https://github.com/cran/mvMORPH
+point in time: 20 December 2023Timestamp +2023-12-20T00:00:00Z
Timezone +00:00
Calendar Gregorian
Precision 1 day
Before 0
After 0
-Timestamp
++2023-12-20T00:00:00Z
-Timezone
++00:00
-Calendar
+Gregorian
-Precision
+day
 Before
 After
@@ links / mardi / name / links / mardi / name @@
+Software:31910

Latest revision as of 19:41, 21 March 2024

Multivariate Comparative Tools for Fitting Evolutionary Models to Morphometric Data

Language	Label	Description	Also known as
English	mvMORPH	Multivariate Comparative Tools for Fitting Evolutionary Models to Morphometric Data

Statements

0 references

0 references

software version identifier

1.1.7

publication date

14 March 2023

0 references

1.0.1

publication date

7 February 2014

0 references

1.0.2

publication date

24 April 2014

0 references

1.0.3

publication date

17 March 2015

0 references

1.0.4

publication date

22 March 2015

0 references

1.0.5

publication date

4 May 2015

0 references

1.0.6

publication date

24 August 2015

0 references

1.0.7

publication date

18 June 2016

0 references

1.0.8

publication date

25 October 2016

0 references

1.0.9

publication date

8 June 2017

0 references

1.0

publication date

8 October 2013

0 references

1.1.0

publication date

4 August 2018

0 references

1.1.1

publication date

9 January 2020

0 references

1.1.2

publication date

17 April 2020

0 references

1.1.3

publication date

12 June 2020

0 references

1.1.4

publication date

17 March 2021

0 references

1.1.5

publication date

3 May 2022

0 references

1.1.6

publication date

9 May 2022

0 references

1.1.8

publication date

29 November 2023

0 references

1.1.9

publication date

9 December 2023

0 references

0 references

0 references

0 references

9 December 2023

0 references

description

Fits multivariate (Brownian Motion, Early Burst, ACDC, Ornstein-Uhlenbeck and Shifts) models of continuous traits evolution on trees and time series. 'mvMORPH' also proposes high-dimensional multivariate comparative tools (linear models using Generalized Least Squares and multivariate tests) based on penalized likelihood. See Clavel et al. (2015) <doi:10.1111/2041-210X.12420>, Clavel et al. (2019) <doi:10.1093/sysbio/syy045>, and Clavel & Morlon (2020) <doi:10.1093/sysbio/syaa010>.

0 references

author

Julien Clavel

0 references

copyright license

GNU General Public License, version 2.0

0 references

GNU General Public License, version 3.0

edition/version

expanded from: GPL (≥ 2.0) (English)

0 references

depends on software