Extending the multi-level method for the simulation of stochastic biological systems

DOI10.1007/S11538-016-0178-9zbMath1352.92062arXiv1412.4069OpenAlexW1793866178WikidataQ50596197 ScholiaQ50596197MaRDI QIDQ347028

Ruth E. Baker, Christian A. Yates, Michael B. Giles, Christopher G. Lester

Publication date: 30 November 2016

Published in: Bulletin of Mathematical Biology (Search for Journal in Brave)

Full work available at URL: https://arxiv.org/abs/1412.4069

zbMATH Keywords

gene regulatory networksstochastic simulationmulti-levelGillespie algorithmtau-leaping

Mathematics Subject Classification ID

Probabilistic models, generic numerical methods in probability and statistics (65C20) Biochemistry, molecular biology (92C40) Computational methods for stochastic equations (aspects of stochastic analysis) (60H35) Systems biology, networks (92C42)

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Cites Work

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• Multilevel Monte Carlo Path Simulation
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• Modeling and Simulating Chemical Reactions
• Analysis of a Stochastic Chemical System Close to a SNIPER Bifurcation of Its Mean-Field Model
• Markov Chains
• Stochastic modelling of gene regulatory networks

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