Modeling synthetic gene oscillators

DOI10.1016/J.MBS.2012.01.001zbMath1237.92028OpenAlexW2068784631WikidataQ37977780 ScholiaQ37977780MaRDI QIDQ419382

Matthew R. Bennett, Erin L. O'Brien, Elizabeth Van Itallie

Publication date: 18 May 2012

Published in: Mathematical Biosciences (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.mbs.2012.01.001

zbMATH Keywords

delaygene networkssynthetic biologytranscriptional regulation

Mathematics Subject Classification ID

Biochemistry, molecular biology (92C40) Genetics and epigenetics (92D10) Systems biology, networks (92C42)

Related Items (9)

Long negative feedback loop enhances period tunability of biological oscillators ⋮ Computational modelling of cancer development and growth: modelling at multiple scales and multiscale modelling ⋮ Spatio-temporal models of synthetic genetic oscillators ⋮ Spatiotemporal dynamics of distributed synthetic genetic circuits ⋮ How to couple identical ring oscillators to get quasiperiodicity, extended chaos, multistability, and the loss of symmetry ⋮ Spatial-stochastic modelling of synthetic gene regulatory networks ⋮ A general principle for spontaneous genetic symmetry breaking and pattern formation within cell populations ⋮ The Effects of Time-Varying Temperature on Delays in Genetic Networks ⋮ Synchronization analysis for a class of genetic oscillator networks

Cites Work

• Unnamed Item
• A generalized model of the repressilator
• Stochastic delay differential equations for genetic regulatory networks
• Modeling transcriptional control in gene networks -- methods, recent results, and future directions
• In vitro DNA-based predator-prey system with oscillatory kinetics.
• From Kuramoto to Crawford: Exploring the onset of synchronization in population of coupled oscillators
• Mathematical biology. Vol. 1: An introduction.
• Quasi-steady state assumptions for non-isolated enzyme-catalysed reactions
• The role of dimerization in noise reduction of simple genetic networks
• A two variable delay model for the circadian rhythm of \textit{Neurospora crassa}
• Studying genetic regulatory networks at the molecular level: delayed reaction stochastic models
• Designer gene networks: Towards fundamental cellular control
• Synchronization of electronic genetic networks
• Huygens's clocks
• Transient dynamics around unstable periodic orbits in the generalized repressilator model
• Modeling a synthetic multicellular clock: Repressilators coupled by quorum sensing
• Long Period Oscillations in aG₀Model of Hematopoietic Stem Cells

This page was built for publication: Modeling synthetic gene oscillators