Bayesian variable selection regression for genome-wide association studies and other large-scale problems

DOI10.1214/11-aoas455zbMath1229.62145arXiv1110.6019MaRDI QIDQ141819

Yongtao Guan, Matthew Stephens, Matthew Stephens, Yongtao Guan

Publication date: 1 September 2011

Published in: The Annals of Applied Statistics (Search for Journal in Brave)

Full work available at URL: https://arxiv.org/abs/1110.6019

zbMATH Keywords

heritability; shrinkage; Bayesian regression; multi-SNP analysis

Mathematics Subject Classification ID

62J05: Linear regression; mixed models

62P10: Applications of statistics to biology and medical sciences; meta analysis

62F15: Bayesian inference

92D10: Genetics and epigenetics

Related Items

MMVBVS, pi-MASS, Variable selection for nonparametric Gaussian process priors: Models and computational strategies, Incorporating biological information into linear models: a Bayesian approach to the selection of pathways and genes

Uses Software

• Eigenstrat

Cites Work

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• Nonparametric regression using Bayesian variable selection
• Optimal predictive model selection.
• Least angle regression. (With discussion)
• Small-world MCMC and convergence to multi-modal distributions: from slow mixing to fast mixing
• Mixtures of g Priors for Bayesian Variable Selection
• Bayesian Variable Selection in Linear Regression
• Rao-Blackwellisation of sampling schemes
• Bayesian Model Averaging for Linear Regression Models
• Variable Selection via Nonconcave Penalized Likelihood and its Oracle Properties
• Bayes Model Averaging with Selection of Regressors
• Bayesian Analysis of Binary and Polychotomous Response Data
• Regularization and Variable Selection Via the Elastic Net
• Monte Carlo sampling methods using Markov chains and their applications
• A review of Bayesian variable selection methods: what, how and which