Eigenstrat

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swMATH33845MaRDI QIDQ45554


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Source code repository: https://github.com/DReichLab/EIG/tree/master/EIGENSTRAT




Related Items (60)

Nonparametric variable selection and classification: the CATCH algorithmEffective sample size: quick estimation of the effect of related samples in genetic case-control association analysesA Bayesian graphical model for genome-wide association studies (GWAS)Doubly debiased Lasso: high-dimensional inference under hidden confoundingPowerful test based on conditional effects for genome-wide screeningCombining dependent F-tests for robust association of quantitative traits under genetic model uncertaintyAugmentation schemes for particle MCMCPrincipal components adjusted variable screeningSparse latent factor regression models for genome-wide and epigenome-wide association studiesA fast, provably accurate approximation algorithm for sparse principal component analysis reveals human genetic variation across the worldComparing the performance of linear and nonlinear principal components in the context of high-dimensional genomic data integrationA statistical test for detecting parent-of-origin effects when parental information is missingRecursive transformed component statistical analysis for incipient fault detectionA comparison of principal component methods between multiple phenotype regression and multiple SNP regression in genetic association studiesLeveraging local identity-by-descent increases the power of case/control GWAS with related individualsPenalized partial least square applied to structured dataAnalysis of genetic association studies incorporating prior information of genetic modelsConvergence and prediction of principal component scores in high-dimensional settingsMultiple hypothesis testing adjusted for latent variables, with an application to the AGEMAP gene expression dataToward the human genotopeSparse probit linear mixed modelPopulation structure and cryptic relatedness in genetic association studiesSeparating populations with wide data: a spectral analysisImputation and low-rank estimation with missing not at random dataHow Genes Modulate Patterns of Aging-Related Changes on the Way to 100: Biodemographic Models and Methods in Genetic Analyses of Longitudinal DataAsymptotic powers for matched trend tests and robust matched trend tests in case-control genetic association studiesSimple and reliable estimators of coefficients of interest in a model with high-dimensional confounding effects\(p\)-value calibration for multiple testing problems in genomicsRobust methods to detect disease-genotype association in genetic association studies: calculate \(p\)-values using exact conditional enumeration instead of simulated permutations or asymptotic approximationsDescartes' rule of signs and the identifiability of population demographic models from genomic variation dataUnifying and Generalizing Methods for Removing Unwanted Variation Based on Negative ControlsTesting significance of features by lassoed principal componentsThe use of plasmodes as a supplement to simulations: a simple example evaluating individual admixture estimation methodologiesDiagonally Dominant Principal Component AnalysisBayes factors in the presence of population stratificationIdentifying QTLs and epistasis in structured plant populations using adaptive mixed LASSOA spectral graph approach to discovering genetic ancestryUnnamed ItemEigenanalysis of SNP data with an identity by descent interpretationThe principal problem with principal components regressionAsymptotic properties of principal component analysis and shrinkage-bias adjustment under the generalized spiked population modelThe Blessings of Multiple CausesComment on “Blessings of Multiple Causes”Bayesian variable selection regression for genome-wide association studies and other large-scale problemsCertifiably optimal sparse principal component analysisReliable clustering of Bernoulli mixture modelsFlexible Modelling of Genetic Effects on Function-Valued TraitsGenetic Variant Set-Based Tests Using the Generalized Berk–Jones Statistic With Application to a Genome-Wide Association Study of Breast CancerA Modified Random Survival Forests Algorithm for High Dimensional Predictors and Self-Reported OutcomesAccurate and Efficient P-value Calculation Via Gaussian Approximation: A Novel Monte-Carlo MethodUnnamed ItemNonsparse Learning with Latent VariablesA practical approach to adjusting for population stratification in genome-wide association studies: principal components and propensity scores (PCAPS)Variable selection for mixed data clustering: application in human population genomicsA knockoff filter for high-dimensional selective inferenceGene-Based Association Testing of Dichotomous Traits With Generalized Functional Linear Mixed Models Using Extended Pedigrees: Applications to Age-Related Macular DegenerationAdjusting for spatial effects in genomic predictionROP: matrix recovery via rank-one projectionsAn impossibility result for phylogeny reconstruction from \(k\)-mer countsRobust computation of linear models by convex relaxation


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