Cited in
(only showing first 100 items - show all)- Convergence and prediction of principal component scores in high-dimensional settings
- lfmm
- Combining dependent \(F\)-tests for robust association of quantitative traits under genetic model uncertainty
- A Bayesian graphical model for genome-wide association studies (GWAS)
- Variable selection for mixed data clustering: application in human population genomics
- Augmentation schemes for particle MCMC
- A knockoff filter for high-dimensional selective inference
- Imputation and low-rank estimation with missing not at random data
- Bayes factors in the presence of population stratification
- Leveraging local identity-by-descent increases the power of case/control GWAS with related individuals
- Robust computation of linear models by convex relaxation
- Powerful test based on conditional effects for genome-wide screening
- Accurate and Efficient P-value Calculation Via Gaussian Approximation: A Novel Monte-Carlo Method
- \(p\)-value calibration for multiple testing problems in genomics
- Asymptotic properties of principal component analysis and shrinkage-bias adjustment under the generalized spiked population model
- Effective sample size: quick estimation of the effect of related samples in genetic case-control association analyses
- Bayesian variable selection regression for genome-wide association studies and other large-scale problems
- PcGets
- PLINK
- GenAlEx
- CLUMPP
- SDMTools
- ProbABEL
- FAMT
- leapp
- aplpack
- pedigreem
- ADMIXMAP
- PSMIX
- rrBLUP
- STRUCTURE
- IMPUTE
- GWAsimulator
- genMOSS
- MaCH
- pi-MASS
- HAPGEN2
- denoiseR
- qvalue
- Identifying QTLs and epistasis in structured plant populations using adaptive mixed LASSO
- PennCNV
- EigenPrism
- FFBSKAT
- GCTA
- RelateAdmix
- GEMMA
- FTEC
- Rassoc
- hapassoc
- admixture
- LAMP
- ePCA
- METAL
- BUScorrect
- MPAT
- FMS
- MaXact
- DREBIN
- ANCESTRYMAP
- Frappe
- GemTools
- HapMix
- SABER
- PySyft
- selective-inference
- ccSVM
- Qxpak
- pedigreemm
- PedGenie
- Testing significance of features by lassoed principal components
- ruv
- HDTD
- GeoPCA
- sphunif
- Toward the human genotope
- ROP: matrix recovery via rank-one projections
- Asymptotic powers for matched trend tests and robust matched trend tests in case-control genetic association studies
- Descartes' rule of signs and the identifiability of population demographic models from genomic variation data
- Robust methods to detect disease-genotype association in genetic association studies: calculate \(p\)-values using exact conditional enumeration instead of simulated permutations or asymptotic approximations
- Population structure and cryptic relatedness in genetic association studies
- GWAS Catalog
- ScreeNOT
- DDL
- Certifiably optimal sparse principal component analysis
- Separating populations with wide data: a spectral analysis
- Eigenanalysis of SNP data with an identity by descent interpretation
- Multiple hypothesis testing adjusted for latent variables, with an application to the AGEMAP gene expression data
- Flexible modelling of genetic effects on function-valued traits
- ThreSPCA
- The blessings of multiple causes
- Diagonally Dominant Principal Component Analysis
- Nonsparse learning with latent variables
- Principal components adjusted variable screening
- Robust PCA by manifold optimization
- Recursive transformed component statistical analysis for incipient fault detection
- A practical approach to adjusting for population stratification in genome-wide association studies: principal components and propensity scores (PCAPS)
- Dual principal component pursuit
- Sparse probit linear mixed model
- Reliable clustering of Bernoulli mixture models
- Doubly debiased Lasso: high-dimensional inference under hidden confounding
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