Non-equilibrium theory of the allele frequency spectrum

DOI10.1016/j.tpb.2006.06.005zbMath1118.92041arXivq-bio/0604010OpenAlexW2038793143WikidataQ46543740 ScholiaQ46543740MaRDI QIDQ885377

Yelena Shvets, Steven N. Evans, Montgomery Slatkin

Publication date: 13 June 2007

Published in: Theoretical Population Biology (Search for Journal in Brave)

Full work available at URL: https://arxiv.org/abs/q-bio/0604010

zbMATH Keywords

Kolmogorov forward equationPopulation geneticsDiffusion theoryEntrance lawrecent human population growth

Mathematics Subject Classification ID

Problems related to evolution (92D15) Applications of stochastic analysis (to PDEs, etc.) (60H30) Genetics and epigenetics (92D10) Applications of Brownian motions and diffusion theory (population genetics, absorption problems, etc.) (60J70)

Related Items (16)

The non-equilibrium allele frequency spectrum in a Poisson random field framework ⋮ A modified wright-Fisher model that incorporates \(N_e\): a variant of the standard model with increased biological realism and reduced computational complexity ⋮ Joint effect of changing selection and demography on the site frequency spectrum ⋮ Developments in coalescent theory from single loci to chromosomes ⋮ Eigenfunctions and the Dirichlet Problem for the Classical Kimura Diffusion Operator ⋮ The site-frequency spectrum of linked sites ⋮ The diversity of a distributed genome in bacterial populations ⋮ Analytical results on the neutral non-equilibrium allele frequency spectrum based on diffusion theory ⋮ Non-equilibrium allele frequency spectra via spectral methods ⋮ The effect of recurrent mutation on the frequency spectrum of a segregating site and the age of an allele ⋮ Analytical results on the neutral non-equilibrium allele frequency spectrum based on diffusion theory ⋮ Non-equilibrium allele frequency spectra via spectral methods ⋮ Inference in population genetics using forward and backward, discrete and continuous time processes ⋮ An analytical framework in the general coalescent tree setting for analyzing polymorphisms created by two mutations ⋮ The joint allele frequency spectrum of multiple populations: a coalescent theory approach ⋮ The allele-frequency spectrum in a decoupled Moran model with mutation, drift, and directional selection, assuming small mutation rates

Cites Work

• Unnamed Item
• Unnamed Item
• Unnamed Item
• Mathematical population genetics. I: Theoretical introduction.
• The frequency spectrum of a mutation, and its age, in a general diffusion model
• A decomposition of Bessel Bridges
• Path Decomposition and Continuity of Local Time for One-Dimensional Diffusions, I
• The age of a mutation in a general coalescent tree
• Diffusion models in population genetics
• The Distribution of Gene Frequencies Under Irreversible Mutation
• SOLUTION OF A PROCESS OF RANDOM GENETIC DRIFT WITH A CONTINUOUS MODEL

This page was built for publication: Non-equilibrium theory of the allele frequency spectrum