Multi-target QPDR classification model for human breast and colon cancer-related proteins using star graph topological indices

DOI10.1016/J.JTBI.2008.11.017zbMath1400.92276OpenAlexW1971842146WikidataQ43489613 ScholiaQ43489613MaRDI QIDQ1617551

Cristian Robert Munteanu, Alexandre L. Magalhães, Eugenio Uriarte, Humberto González Díaz

Publication date: 8 November 2018

Published in: Journal of Theoretical Biology (Search for Journal in Brave)

Full work available at URL: http://europepmc.org/articles/pmc7094125

zbMATH Keywords

star graphcancer theoretical modelclinical proteomicsGDA methodinput-coded multi-target QPDR

Mathematics Subject Classification ID

Applications of statistics to biology and medical sciences; meta analysis (62P10) Applications of graph theory (05C90) Medical applications (general) (92C50) Protein sequences, DNA sequences (92D20)

Related Items (5)

Protein functional class prediction using global encoding of amino acid sequence ⋮ 2D-MH: a web-server for generating graphic representation of protein sequences based on the physicochemical properties of their constituent amino acids ⋮ Three 3D graphical representations of DNA primary sequences based on the classifications of DNA bases and their applications ⋮ The disposition of the LZCC protein residues in wenxiang diagram provides new insights into the protein-protein interaction mechanism ⋮ Classification of signaling proteins based on molecular star graph descriptors using machine learning models

Uses Software

• Unnamed Item
• Cell-PLoc
• wxPython
• S2SNet

Cites Work

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• Prediction protein structural classes with pseudo-amino acid composition: approximate entropy and hydrophobicity pattern
• The modified Mahalanobis discriminant for predicting outer membrane proteins by using Chou's pseudo amino acid composition
• An application of gene comparative image for predicting the effect on replication ratio by HBV virus gene missense mutation
• Prediction of the subcellular location of apoptosis proteins
• Prediction of apoptosis protein subcellular location using improved hybrid approach and pseudo-amino acid composition
• Using Chou's amphiphilic pseudo-amino acid composition and support vector machine for prediction of enzyme subfamily classes
• New 3D graphical representation of DNA sequence based on dual nucleotides
• The community structure of human cellular signaling network

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