Diffusion maps, spectral clustering and reaction coordinates of dynamical systems

From MaRDI portal
Revision as of 02:30, 3 February 2024 by Import240129110113 (talk | contribs) (Created automatically from import240129110113)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)

Publication:2497982

DOI10.1016/j.acha.2005.07.004zbMath1103.60069arXivmath/0503445OpenAlexW2117684310MaRDI QIDQ2497982

Stéphane Lafon, Ioannis G. Kevrekidis, Boaz Nadler, Ronald R. Coifman

Publication date: 4 August 2006

Published in: Applied and Computational Harmonic Analysis (Search for Journal in Brave)

Full work available at URL: https://arxiv.org/abs/math/0503445




Related Items (86)

Local kernels and the geometric structure of dataDiffusion-based kernel methods on Euclidean metric measure spacesProbing multipartite entanglement, coherence and quantum information preservation under classical Ornstein–Uhlenbeck noiseEquation-free Model Reduction in Agent-based Computations: Coarse-grained Bifurcation and Variable-free Rare Event AnalysisClustering Dynamics on Graphs: From Spectral Clustering to Mean Shift Through Fokker–Planck InterpolationComputational coarse graining of a randomly forced one-dimensional Burgers equationNumerical bifurcation analysis of PDEs from lattice Boltzmann model simulations: a parsimonious machine learning approachExtracting Sparse High-Dimensional Dynamics from Limited DataModern Koopman Theory for Dynamical SystemsFuzzy spectral clustering by PCCA+: application to Markov state models and data classificationAn equivalence between the limit smoothness and the rate of convergence for a general contraction operator familyManifold learning for the emulation of spatial fields from computational modelsA bag-of-paths framework for network data analysisNonparametric Uncertainty Quantification for Stochastic Gradient FlowsGrassmannian diffusion maps based surrogate modeling via geometric harmonicsUnderstanding Graph Neural Networks with Generalized Geometric Scattering TransformsData-Driven Discovery of Governing Equations for Coarse-Grained Heterogeneous Network DynamicsPhysics-agnostic and physics-infused machine learning for thin films flows: modelling, and predictions from small dataCoarse analysis of collective behaviors: bifurcation analysis of the optimal velocity model for traffic jam formationReduction methods in climate dynamics -- a brief reviewA data-driven approximation of the koopman operator: extending dynamic mode decompositionGeometric scattering on measure spacesLandmark diffusion maps (L-dMaps): accelerated manifold learning out-of-sample extensionMathematics of smoothed particle hydrodynamics: a study via nonlocal Stokes equationsRobust Inference of Manifold Density and Geometry by Doubly Stochastic ScalingVariable bandwidth diffusion kernelsData-driven control of agent-based models: an equation/variable-free machine learning approachTowards mesoscopic ergodic theoryFunctional diffusion mapsMeasure-based diffusion grid construction and high-dimensional data discretizationFuzzy diffusion distance learning for cartoon similarity estimationPatch-to-tensor embeddingAn efficient tree-based computation of a metric comparable to a natural diffusion distanceHearing the clusters of a graph: A distributed algorithmAn experimental investigation of kernels on graphs for collaborative recommendation and semisupervised classificationSome remarks on diffusion distancesThomas Bayes' walk on manifoldsData clustering based on Langevin annealing with a self-consistent potentialContinuous-time Random Walks for the Numerical Solution of Stochastic Differential EquationsAn equation-free approach to coarse-graining the dynamics of networksEquation free projective integration: a multiscale method applied to a plasma ion acoustic waveCoarse analysis of collective motion with different communication mechanismsAn equation-free approach to analyzing heterogeneous cell population dynamicsManifold learning for organizing unstructured sets of process observationsNon-linear independent component analysis with diffusion mapsLearning the geometry of common latent variables using alternating-diffusionParsimonious representation of nonlinear dynamical systems through manifold learning: a chemotaxis case studyUnderstanding the geometry of transport: Diffusion maps for Lagrangian trajectory data unravel coherent setsIntroducing User-Prescribed Constraints in Markov Chains for Nonlinear Dimensionality ReductionTransition manifolds of complex metastable systems. Theory and data-driven computation of effective dynamicsPoint Cloud Discretization of Fokker--Planck Operators for Committor FunctionsDimensionality reduction: an interpretation from manifold regularization perspectiveNonlinear Laplacian spectral analysis for time series with intermittency and low-frequency variabilityLearning Binary Hash Codes for Large-Scale Image SearchGeometric fluid approximation for general continuous-time Markov chainsPhysics-Constrained, Data-Driven Discovery of Coarse-Grained DynamicsA spectral notion of Gromov-Wasserstein distance and related methodsA stochastic multiscale model for electricity generation capacity expansionATLAS: A Geometric Approach to Learning High-Dimensional Stochastic Systems Near ManifoldsOrientability and diffusion mapsAn equation-free computational approach for extracting population-level behavior from individual-based models of biological dispersalCoarse-grained computation for particle coagulation and sintering processes by linking quadrature method of moments with Monte-CarloDiffusion mapsDimensionality reduction of complex metastable systems via kernel embeddings of transition manifoldsGo with the flow, on Jupiter and snow. Coherence from model-free video data without trajectoriesTowards effective dynamics in complex systems by Markov kernel approximationDiffusion maps tailored to arbitrary non-degenerate Itô processesData-driven model reduction and transfer operator approximationTowards hybrid system modeling of uncertain complex dynamical systemsSome extensions of E. Stein's work on Littlewood-Paley theory applied to symmetric diffusion semigroupsNonlinear Laplacian spectral analysis: capturing intermittent and low‐frequency spatiotemporal patterns in high‐dimensional dataScalable Extended Dynamic Mode Decomposition Using Random Kernel ApproximationA multiscale environment for learning by diffusionDiffusion State Distances: Multitemporal Analysis, Fast Algorithms, and Applications to Biological NetworksDoubly Stochastic Normalization of the Gaussian Kernel Is Robust to Heteroskedastic NoiseData-driven prediction of multistable systems from sparse measurementsLatent common manifold learning with alternating diffusion: analysis and applicationsDynamics-Adapted Cone KernelsA Tailored Convolutional Neural Network for Nonlinear Manifold Learning of Computational Physics Data Using Unstructured Spatial DiscretizationsKernel Analog Forecasting: Multiscale Test ProblemsParameter Rating by Diffusion GradientMetric-based upscalingData-driven efficient solvers for Langevin dynamics on manifold in high dimensionsGaussian Process Landmarking for Three-Dimensional Geometric MorphometricsRecovering Hidden Components in Multimodal Data with Composite Diffusion OperatorsPoincaré maps for multiscale physics discovery and nonlinear Floquet theory



Cites Work


This page was built for publication: Diffusion maps, spectral clustering and reaction coordinates of dynamical systems