gRbase

A Package for Graphical Modelling in R

Last update: 29 November 2023

Copyright license: GNU General Public License, version 3.0, GNU General Public License, version 2.0

Software version identifier: 1.8.9, 0.1.0, 0.1.2, 0.1.13, 0.1.23, 0.1.24, 0.1.25, 0.2.0, 0.2.1, 0.2.2, 0.2.3, 0.2.4, 0.3.0, 0.3.1, 0.3.2, 0.4.0, 0.4.1, 0.4.2, 0.5.0, 0.6.0, 0.6.4, 0.6.6, 0.7.0, 0.8.0, 0.9.0, 1.0.0, 1.0.1, 1.1.0, 1.1.2, 1.2.0, 1.3.0, 1.3.2, 1.3.3, 1.3.4, 1.3.5, 1.3.8, 1.3.9, 1.4.0, 1.4.1, 1.4.2, 1.4.4, 1.5-0, 1.5-1, 1.6-0, 1.6-1, 1.6-2, 1.6-3, 1.6-4, 1.6-5, 1.6-6, 1.6-7, 1.6-8, 1.6-9, 1.6-10, 1.6-11, 1.6-12, 1.7-0.1, 1.7-0, 1.7-1, 1.7-2, 1.7-5, 1.8-1, 1.8-3.1, 1.8-3.4, 1.8-3, 1.8-4.5, 1.8-5.1, 1.8-6.4, 1.8-6.6, 1.8-6.7, 1.8.7, 1.8.8, 1.9.0, 2.0.0, 2.0.1

Source code repository: https://github.com/cran/gRbase

Description

The 'gRbase' package provides graphical modelling features used by e.g. the packages 'gRain', 'gRim' and 'gRc'. 'gRbase' implements graph algorithms including (i) maximum cardinality search (for marked and unmarked graphs). (ii) moralization, (iii) triangulation, (iv) creation of junction tree. 'gRbase' facilitates array operations, 'gRbase' implements functions for testing for conditional independence. 'gRbase' illustrates how hierarchical log-linear models may be implemented and describes concept of graphical meta data. The facilities of the package are documented in the book by Højsgaard, Edwards and Lauritzen (2012, <doi:10.1007/978-1-4614-2299-0>) and in the paper by Dethlefsen and Højsgaard, (2005, <doi:10.18637/jss.v014.i17>). Please see 'citation("gRbase")' for citation details.

Cites work

Related Items (24)

Discriminant analysis with Gaussian graphical tree models ⋮ Bayesian Networks ⋮ Thinning a Triangulation of a Bayesian Network or Undirected Graph to Create a Minimal Triangulation ⋮ Unnamed Item ⋮ gRaven ⋮ DNAmixturesLite ⋮ KinMixLite ⋮ OrdCD ⋮ Searching for a source of difference in graphical models ⋮ SourceSet ⋮ bnClustOmics ⋮ GGRidge ⋮ gmat ⋮ gRain ⋮ gRc ⋮ topologyGSA ⋮ bnspatial ⋮ gRim ⋮ simPATHy ⋮ rags2ridges ⋮ mcmcabn ⋮ bnmonitor ⋮ Unnamed Item ⋮ BCDAG

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