Steady-state fluctuations of a genetic feedback loop with fluctuating rate parameters using the unified colored noise approximation

DOI10.1088/1751-8121/ABA4D0OpenAlexW3041466691MaRDI QIDQ5870734

James Holehouse, Ramon Grima, Abhishek Gupta

Publication date: 23 January 2023

Published in: Journal of Physics A: Mathematical and Theoretical (Search for Journal in Brave)

Full work available at URL: https://arxiv.org/abs/2004.02011

zbMATH Keywords

Fokker-Planck equationstochastic simulationsgene regulatory networksstochastic gene expression

Mathematics Subject Classification ID

Quantum theory (81-XX) Statistical mechanics, structure of matter (82-XX)

Related Items (5)

Stationary and Time-Dependent Molecular Distributions in Slow-Fast Feedback Circuits ⋮ Bye bye, linearity, bye: quantification of the mean for linear CRNs in a random environment ⋮ Noise induced bistability in a fluctuating environment ⋮ Bimodality in gene expression without feedback: from Gaussian white noise to log-normal coloured noise ⋮ Hawkes process modelling for chemical reaction networks in a random environment

Cites Work

• Unnamed Item
• Stochastic hybrid models of gene regulatory networks -- a PDE approach
• Influence of gene copy number on self-regulated gene expression
• Stochastic methods. A handbook for the natural and social sciences
• The Fokker-Planck equation. Methods of solutions and applications.
• Stochastic calculus in physics
• Stationary moments, distribution conjugation and phenotypic regions in stochastic gene transcription
• Stochastic modeling and numerical simulation of gene regulatory networks with protein bursting
• Multimodality and flexibility of stochastic gene expression
• Dynamic Behavior of Stochastic Gene Expression Models in the Presence of Bursting
• Estimations of intrinsic and extrinsic noise in models of nonlinear genetic networks
• Stochastic Gene Expression with a Multistate Promoter: Breaking Down Exact Distributions
• Decomposition and tunability of expression noise in the presence of coupled feedbacks
• On the Convergence of Ordinary Integrals to Stochastic Integrals

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