Stochastic modeling and numerical simulation of gene regulatory networks with protein bursting
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Publication:2404005
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Cites work
- scientific article; zbMATH DE number 3806623 (Why is no real title available?)
- An introduction to continuum mechanics
- Computing the moments of high dimensional solutions of the master equation
- Effects of jump-diffusion models for the house price dynamics in the pricing of fixed-rate mortgages, insurance and coinsurance
- Finite elements and characteristics for some parabolic-hyperbolic problems
- Fokker–Planck approximation of the master equation in molecular biology
- Hybrid stochastic-deterministic solution of the chemical master equation
- Influence of gene copy number on self-regulated gene expression
- MATCONT
- Method of conditional moments (MCM) for the chemical master equation
- Molecular distributions in gene regulatory dynamics
- Numerical Methods for Convection-Dominated Diffusion Problems Based on Combining the Method of Characteristics with Finite Element or Finite Difference Procedures
- On reduced models for the chemical master equation
- On the transport-diffusion algorithm and its applications to the Navier-Stokes equations
- Ordinary differential equations. An introduction to nonlinear analysis. Transl. from the German by Gerhard Metzen
- Pricing pension plans under jump-diffusion models for the salary
- Solving chemical master equations by adaptive wavelet compression
- Stochastic methods. A handbook for the natural and social sciences
Cited in
(14)- Steady-state fluctuations of a genetic feedback loop with fluctuating rate parameters using the unified colored noise approximation
- High cooperativity in negative feedback can amplify noisy gene expression
- Exact and WKB-approximate distributions in a gene expression model with feedback in burst frequency, burst size, and protein stability
- Deep learning approximations for non-local nonlinear PDEs with Neumann boundary conditions
- Switches in a genetic regulatory system under multiplicative non-Gaussian noise
- Impacts of multiple time delays on a gene regulatory network mediated by small noncoding RNA
- Application of the Goodwin model to autoregulatory feedback for stochastic gene expression
- Stochastic hybrid models of gene regulatory networks -- a PDE approach
- A kinetic finite volume discretization of the multidimensional PIDE model for gene regulatory networks
- Reduction of a stochastic model of gene expression: Lagrangian dynamics gives access to basins of attraction as cell types and metastabilty
- Numerical analysis of a method for a partial integro-differential equation model in regulatory gene networks
- Exponential equilibration of genetic circuits using entropy methods
- Algebraic expressions of conditional expectations in gene regulatory networks
- Bursting and complex oscillatory patterns in a gene regulatory network model
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