A Bayesian approach to nonlinear probit gene selection and classification

DOI10.1016/J.JFRANKLIN.2003.12.010MaRDI QIDQ2492548zbMATH OpenOpenAlexFDO

Authors Xiaobo Zhou, Edward R. Dougherty, Xiaodong Wang

Publication date 14 June 2006

Published in Journal of the Franklin Institute (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/j.jfranklin.2003.12.010

zbMATH Keywords

Bayesian gene selectionCancer classificationGene microarraysGibbs samplerSequential Monte Carlo

Mathematics Subject Classification ID

Bayesian inference (62F15) Bootstrap, jackknife and other resampling methods (62F40) General nonlinear regression (62J02) Applications of statistics to biology and medical sciences; meta analysis (62P10) Monte Carlo methods (65C05) Medical applications (general) (92C50) Genetics and epigenetics (92D10)

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Cites work

• Adaptive joint detection and decoding in flat-fading channels via mixture Kalman filtering
• Bayesian Analysis of Binary and Polychotomous Response Data
• Construction of genomic networks using mutual-information clustering and reversible-jump Markov-chain-Monte-Carlo predictor design
• Gene selection for cancer classification using support vector machines
• scientific article; zbMATH DE number 4020230 (Why is no real title available?)
• Mixture Kalman Filters
• On the use of MDL principle in gene expression prediction
• Selection bias in gene extraction on the basis of microarray gene-expression data
• Sequential Imputations and Bayesian Missing Data Problems
• Sequential Monte Carlo Methods for Dynamic Systems
• Sequential Monte Carlo Methods in Practice

Cited in

(14)

• Gene prediction using multinomial probit regression with Bayesian gene selection
• Sparse Bayesian variable selection in kernel probit model for analyzing high-dimensional data
• Bayesian variable selection in multinomial probit model for classifying high-dimensional data
• Bayesian classification for bivariate normal gene expression
• Classification of multi class dataset using wavelet power spectrum
• Bayesian variable selection for probit mixed models applied to gene selection
• A Bayesian nonparametric mixture model for selecting genes and gene subnetworks
• A study of variable selection using \(g\)-prior distribution with ridge parameter
• Bayesian neural networks for selection of drug sensitive genes
• Bayesian Classification and Non‐Bayesian Label Estimation via EM Algorithm to Identify Differentially Expressed Genes: a Comparative Study
• An MCMC model search algorithm for regression problems
• NONLINEAR PROBIT GENE CLASSIFICATION USING MUTUAL INFORMATION AND WAVELET-BASED FEATURE SELECTION
• A confidence interval test for the detection of structural breaks
• Bayesian binary kernel probit model for microarray based cancer classification and gene selection

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