An Evolutionary Distance Based on Maximal Unique Matches

DOI10.1080/03610920903140213MaRDI QIDQ3562416zbMATH OpenOpenAlexFDO

Authors Frédéric Guyon, Alain Guénoche

Publication date 21 May 2010

Published in Communications in Statistics: Theory and Methods (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1080/03610920903140213

zbMATH Keywords

bacterial phylogenyevolutionary simulationgenome distancemaximal unique matches

Mathematics Subject Classification ID

Applications of graph theory (05C90) Computational methods for problems pertaining to biology (92-08) Systems biology, networks (92C42) Problems related to evolution (92D15)

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Cites work

• A Space-Economical Suffix Tree Construction Algorithm
• Comparison of phylogenetic trees
• Compound Poisson approximation of word counts in DNA sequences
• Transforming cabbage into turnip

Cited in

(4)

• Comparison of alignment free string distances for complete genome phylogeny
• PROKARYOTIC PHYLOGENY BASED ON COMPLETE GENOMES WITHOUT SEQUENCE ALIGNMENT
• Distance, correlation and mutual information among portraits of organisms based on complete genomes
• Comparing bacterial genomes from linear orders of patterns

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