An accelerated computational approach in proteomics

DOI10.1007/978-981-13-9097-5_16MaRDI QIDQ3297215zbMATH OpenOpenAlexFDO

Authors Swati Bhardwaj, Venkateshwarlu Yellaswamy Gudur, Amit Acharyya

Publication date 3 July 2020

Published in Series in BioEngineering (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1007/978-981-13-9097-5_16

zbMATH Keywords

mass spectrometryprotein identificationproteomics

Mathematics Subject Classification ID

Computational methods for problems pertaining to biology (92-08) Protein sequences, DNA sequences (92D20)

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Cites work

• Algorithm and Architecture for N-D Vector Cross-Product Computation
• An efficient Jacobi-like algorithm for parallel eigenvalue computation
• Coordinate Rotation Based Low Complexity N-D FastICA Algorithm and Architecture
• Cross Product Identities in Arbitrary Dimension
• Efficient string matching
• Speech Signal Enhancement Based on MAP Algorithm in the ICA Space
• The exact online string matching problem: a review of the most recent results
• Vector cross products inndimensions

Cited in

(5)

• Scalable big data analytics for protein bioinformatics. Efficient computational solutions for protein structures
• High-performance algorithms for mass spectrometry-based omics
• Machine learning for metabolic identification
• The Ten Most Wanted Solutions in Protein Bioinformatics
• Knowledge Discovery in Proteomics

Describes a project that uses

Uses Software

• FastICA
• Xilinx
• PhysioToolkit
• UniProt
• GenBank
• ExPASy
• LIMPIC

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