An introduction to tile-based self-assembly

DOI10.1007/978-3-642-32894-7_6MaRDI QIDQ4648188zbMATH OpenOpenAlexFDO

Authors Matthew J. Patitz

Publication date 8 November 2012

Published in Unconventional Computation and Natural Computation (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1007/978-3-642-32894-7_6

zbMATH Keywords

2-handed assembly modelabstract tile assembly modelDNA computingkinetic tile assembly modelmolecular computingself-assemblytile assembly system

Mathematics Subject Classification ID

Modes of computation (nondeterministic, parallel, interactive, probabilistic, etc.) (68Q10) Statistical mechanics of nanostructures and nanoparticles (82D80)

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Cited in

(41)

• Convergence rates of Markov chains for some self-assembly and non-saturated Ising models
• Tile automaton in the well-mixed medium
• Self-assembly of 3-D structures using 2-D folding tiles
• Computational modelling of the kinetic tile assembly model using a rule-based approach
• Complexities for high-temperature two-handed tile self-assembly
• Thermodynamic binding networks
• Tilt assembly: algorithms for micro-factories that build objects with uniform external forces
• Producibility in hierarchical self-assembly
• Parallel computation using active self-assembly
• Activatable tiles for compact robust programmable molecular assembly and other applications
• Self-assembled DC resistive circuits with self-controlled voltage-based growth
• An introduction to tile-based self-assembly and a survey of recent results
• Design formalism for DNA self-assembly of polyhedral skeletons using rigid tiles
• DNA tiles, Wang tiles and combinators
• Plane-filling properties of directed figures
• A brief tour of theoretical tile self-assembly
• Self-correcting Self-assembly: Growth Models and the Hammersley Process
• A Self-assembly Model of Time-Dependent Glue Strength
• The Tile Complexity of Linear Assemblies
• Polyomino-Safe DNA Self-assembly via Block Replacement
• A domain-specific language for programming in the tile assembly model
• The effect of malformed tiles on tile assemblies within kTAM
• scientific article; zbMATH DE number 2065647 (Why is no real title available?)
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• Local approach and the theory of lovozerite structures
• Minimal tile and bond-edge types for self-assembling DNA graphs
• Parallel Computation Using Active Self-assembly
• DNA Sticky End Design and Assignment for Robust Algorithmic Self-assembly
• Towards a neighborhood simplification of tile systems: from Moore to quasi-linear dependencies
• Flexible Versus Rigid Tile Assembly
• Algorithmic DNA Self-assembly
• Sequence Design for Stable DNA Tiles
• On Times to Compute Shapes in 2D Tile Self-assembly
• Unconventional Computation
• DNA Computing
• ACTIVE TILE SELF-ASSEMBLY, PART 2: SELF-SIMILAR STRUCTURES AND STRUCTURAL RECURSION
• DNA Computing
• Aspects of Molecular Computing
• Geometric tiles and powers and limitations of geometric hindrance in self-assembly
• On the simulation power of surface chemical reaction networks
• Polyomino-safe DNA self-assembly via block replacement

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