Biological pathway selection through Bayesian integrative modeling

DOI10.1515/SAGMB-2013-0043MaRDI QIDQ2922563zbMATH OpenOpenAlexWikidataFDO

Authors Lingling Zheng, Xiao Yan, Sunil Suchindran, Holly Dressman, John P. Chute, Joseph Lucas

Publication date 13 October 2014

Published in Statistical Applications in Genetics and Molecular Biology (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1515/sagmb-2013-0043

zbMATH Keywords

gene expressionpathway analysisBayesian joint factor analysisintegrated analysisradiation study

Mathematics Subject Classification ID

General biostatistics (92B15)

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Cites work

• A Bayesian analysis strategy for cross-study translation of gene expression biomarkers
• Latent protein trees
• Sparse Bayesian infinite factor models

Cited in

(12)

• A statistical framework for pathway and gene identification from integrative analysis
• Bayesian genomic models for the incorporation of pathway topology knowledge into association studies
• Node-structured integrative Gaussian graphical model guided by pathway information
• Covariance-based analyses of biological pathways
• Bayesian variable selection and data integration for biological regulatory networks
• Refining cellular pathway models using an ensemble of heterogeneous data sources
• Incorporating biological information into linear models: a Bayesian approach to the selection of pathways and genes
• Integrative Bayesian Models Using Post-Selective Inference: A Case Study in Radiogenomics
• Corridendum: ``Biological pathway selection through Bayesian integrative modeling
• Bayesian graphical models for differential pathways
• Pathway-level disease data mining through hyper-box principles
• Bayesian gene set analysis for identifying significant biological pathways

Describes a project that uses

Uses Software

• MSigDB
• GSVA
• DAVID
• KEGG

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