Boolean dynamics revisited through feedback interconnections

DOI10.1007/S11047-018-9716-8MaRDI QIDQ6151156zbMATH OpenOpenAlexFDO

Authors Madalena Chaves, Daniel R. Figueiredo, Manuel A. Martins

Publication date 9 February 2024

Published in Natural Computing (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1007/s11047-018-9716-8

zbMATH Keywords

asynchronous versus synchronous updatesattractor computationBoolean modelsfeedback interconnections

Mathematics Subject Classification ID

Computational methods for attractors of dynamical systems (37M22) Dynamical systems in biology (37N25) Systems biology, networks (92C42)

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Cites work

• An effective network reduction approach to find the dynamical repertoire of discrete dynamic networks
• Attractor computation using interconnected Boolean networks: testing growth rate models in \textit{E. coli}
• Hierarchy of models: From qualitative to quantitative analysis of circadian rhythms in cyanobacteria
• scientific article; zbMATH DE number 5852793 (Why is no real title available?)
• scientific article; zbMATH DE number 1182386 (Why is no real title available?)
• scientific article; zbMATH DE number 2203240 (Why is no real title available?)
• Identification of all steady states in large networks by logical analysis
• Improving the efficiency of attractor cycle identification in Boolean networks
• Interconnection of asynchronous Boolean networks, asymptotic and transient dynamics
• Nested canalyzing, unate cascade, and polynomial functions
• Robustness and fragility of Boolean models for genetic regulatory networks

Cited in

(1)

• Pbn-STAC: deep reinforcement learning-based framework for cellular reprogramming

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