Attractor computation using interconnected Boolean networks: testing growth rate models in \textit{E. coli}

DOI10.1016/J.TCS.2014.06.021zbMATH Open1337.92054OpenAlexW1964430897MaRDI QIDQ498917FDOQ498917

Alfonso Carta, Madalena Chaves

Publication date: 29 September 2015

Published in: Theoretical Computer Science (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.tcs.2014.06.021

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zbMATH Keywords

model discriminationasynchronous Boolean modelsbacterial growth ratesystem interconnection

Mathematics Subject Classification ID

Biochemistry, molecular biology (92C40) Systems biology, networks (92C42)

Cites Work

• Introduction to algorithms
• Title not available (Why is that?)
• Analysis and characterization of asynchronous state transition graphs using extremal states
• Dynamically consistent reduction of logical regulatory graphs
• The topology of the regulatory interactions predicts the expression pattern of the segment polarity genes in \textit{Drosophila melanogaster}
• Biology and control theory: Current challenges
• Interconnection of asynchronous Boolean networks, asymptotic and transient dynamics

Cited In (3)

• Boolean dynamics revisited through feedback interconnections
• Continuous-switch piecewise quadratic models of biological networks: application to bacterial growth
• Interpolative Boolean networks

Uses Software

• Ginsim
• BIOCHAM

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