Attractor computation using interconnected Boolean networks: testing growth rate models in \textit{E. coli}

DOI10.1016/J.TCS.2014.06.021MaRDI QIDQ498917zbMATH OpenOpenAlexFDO

Authors Madalena Chaves, Alfonso Carta

Publication date 29 September 2015

Published in Theoretical Computer Science (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/j.tcs.2014.06.021

zbMATH Keywords

model discriminationasynchronous Boolean modelsbacterial growth ratesystem interconnection

Mathematics Subject Classification ID

Biochemistry, molecular biology (92C40) Systems biology, networks (92C42)

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Cites work

• scientific article; zbMATH DE number 50840 (Why is no real title available?)
• Analysis and characterization of asynchronous state transition graphs using extremal states
• Biology and control theory: Current challenges
• Dynamically consistent reduction of logical regulatory graphs
• Interconnection of asynchronous Boolean networks, asymptotic and transient dynamics
• Introduction to algorithms
• The topology of the regulatory interactions predicts the expression pattern of the segment polarity genes in \textit{Drosophila melanogaster}

Cited in

(3)

• Boolean dynamics revisited through feedback interconnections
• Continuous-switch piecewise quadratic models of biological networks: application to bacterial growth
• Interpolative Boolean networks

Describes a project that uses

Uses Software

• BIOCHAM
• Ginsim

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