Comparison of genomic sequences using the Hamming distance

DOI10.1016/J.JSPI.2003.03.002MaRDI QIDQ1763457zbMATH OpenOpenAlexFDO

Authors Hildete Prisco Pinheiro, Aluísio de Souza Pinheiro, Pranab K. Sen

Publication date 22 February 2005

Published in Journal of Statistical Planning and Inference (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/j.jspi.2003.03.002

zbMATH Keywords

\(U\)-statisticsHamming distanceCategorical dataBootstrapAsymptotic distributionAmino acidGenomeNucleotideStatistical genetics

Mathematics Subject Classification ID

Nonparametric hypothesis testing (62G10) Asymptotic properties of nonparametric inference (62G20) Applications of statistics to biology and medical sciences; meta analysis (62P10) Genetics and epigenetics (92D10) Protein sequences, DNA sequences (92D20)

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Cited in

(14)

• Phylogenetic trees via Hamming distance decomposition tests
• Decomposability of high-dimensional diversity measures: quasi-U-statistics, martingales and nonstandard asymptotics
• Entropy based constrained inference for some HDLSS genomic models: UI tests in a Chen-Stein perspective
• Exploiting flat subspaces in local search for \(p\)-center problem and two fault-tolerant variants
• Asynchronous Distance between Homologous DNA Sequences
• Asymptotically optimal tests for parametric functions against ordered functional alternatives
• Homogeneity tests among groups for microsatellite data
• Parametric Modelling Of Genomic Sequences Distance
• Asymptotic behavior of the scaled mutation rate estimators
• Academic performance of students from entrance to graduation via quasi \(U\)-statistics: a study at a Brazilian research university
• On tests of independence based on minimum \(\varphi \)-divergence estimator with constraints: An application to modeling DNA
• A class of asymptotically normal degenerate quasi \(U\)-statistics
• Clustering and classification problems in genetics through U-statistics
• scientific article; zbMATH DE number 1929946 (Why is no real title available?)

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