Clustering and classification problems in genetics through U-statistics

DOI10.1080/00949655.2017.1374387MaRDI QIDQ4960652zbMATH OpenOpenAlexFDO

Authors Gabriela B. Cybis, Marcio Valk, Sílvia R. C. Lopes

Publication date 23 April 2020

Published in Journal of Statistical Computation and Simulation (Search for Journal in Brave)

Full work available at URL https://arxiv.org/abs/1606.03376

zbMATH Keywords

clusteringclassificationgenetic data\(U\)-statisticshomogeneity teststatistical significancemicroarray gene expression data

Mathematics Subject Classification ID

Statistics (62-XX)

Cites work

• scientific article; zbMATH DE number 4005331 (Why is no real title available?)
• scientific article; zbMATH DE number 47948 (Why is no real title available?)
• scientific article; zbMATH DE number 708500 (Why is no real title available?)
• A Class of Statistics with Asymptotically Normal Distribution
• Analysis of Gene Diversity in Subdivided Populations
• Bootstrapping for Significance of Compact Clusters in Multidimensional Datasets
• Comparison of genomic sequences using the Hamming distance
• Decomposability of high-dimensional diversity measures: quasi-U-statistics, martingales and nonstandard asymptotics
• Power of the likelihood ratio test for models of DNA base substitution
• Statistical Significance of Clustering for High-Dimension, Low–Sample Size Data
• The Theory of Unbiased Estimation
• The coalescent
• The elements of statistical learning. Data mining, inference, and prediction
• Time-series clustering via quasi \(U\)-statistics

Cited in

(10)

• Statistical dynamics of clustering in the genome structure
• On the variable bandwidth kernel estimation of conditional \(U\)-statistics at optimal rates in sup-norm
• U-Statistical Inference for Hierarchical Clustering
• A \(U\)-classifier for high-dimensional data under non-normality
• Capacitated clustering problem in computational biology: combinatorial and statistical approach for sibling reconstruction
• Editorial
• Nonparametric cluster significance testing with reference to a unimodal null distribution
• Weak convergence of the conditional U-statistics for locally stationary functional time series
• Limit theorems for a class of processes generalizing the U -empirical process
• Towards U-statistics clustering inference for multiple groups

Describes a project that uses

Uses Software

• bootstrap
• polysat
• SigClust
• ElemStatLearn
• PhyML
• pvclust

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