Computational modelling of nonlinear calcium waves

DOI10.1016/J.APM.2005.03.013MaRDI QIDQ2504413zbMATH OpenOpenAlexFDO

Authors Xin-She Yang

Publication date 25 September 2006

Published in Applied Mathematical Modelling (Search for Journal in Brave)

Full work available at URL https://arxiv.org/abs/1003.5370

zbMATH Keywords

calcium transportcomplex systemnonlinear wavespattern formationself-organized criticalitystochastic cellular automata

Mathematics Subject Classification ID

Reaction-diffusion equations (35K57) Models and methods for concurrent and distributed computing (process algebras, bisimulation, transition nets, etc.) (68Q85) Physiological flows (76Z05) Physiological flow (92C35)

Abstract: The calcium transport in biological systems is modelled as a reaction-diffusion process. Nonlinear calcium waves are then simulated using a stochastic cellular automaton whose rules are derived from the corresponding coupled partial differential equations. Numerical simulations show self-organized criticality in the complex calcium waves and patterns. Both the stochastic cellular automaton approach and the equation-based simulations can predict the characteristics of calcium waves and complex pattern formation. The implication of locality of calcium distribution with positional information in biological systems is also discussed.

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Cited in

(13)

• Biological computing with diffusion and excitable calcium stores
• Modelling the effects of calcium waves and oscillations on saliva secretion
• Assessing the origin and velocity of Ca\(^{2+}\) waves in three-dimensional tissue: insights from a mathematical model and confocal imaging in mouse pancreas tissue slices
• On the linear stability of some finite difference schemes for nonlinear reaction-diffusion models of chemical reaction networks
• Intracellular Ca\(^{2+}\) nonlinear wave behaviours in a three dimensional ventricular cell model
• Auto-wave processes in cell structures
• Modelling oscillations and waves of cytosolic calcium
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