Consensus decoding of recurrent neural network basecallers

DOI10.1007/978-3-319-91938-6_11MaRDI QIDQ1660127zbMATH OpenOpenAlexFDO

Authors Jordi Silvestre-Ryan, Ian Holmes

Publication date 15 August 2018

Full work available at URL https://doi.org/10.1007/978-3-319-91938-6_11

zbMATH Keywords

alignment envelopedeep learningdynamic programmingfinite state automatananopore sequencing

Mathematics Subject Classification ID

Formal languages and automata (68Q45) Learning and adaptive systems in artificial intelligence (68T05) Neural networks for/in biological studies, artificial life and related topics (92B20) Biochemistry, molecular biology (92C40)

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Cited in

(1)

• Basecalling using hidden Markov models

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