DINAMelt
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(20)- Randomized probe selection algorithm for microarray design
- Alignment-free prediction of mycobacterial DNA promoters based on pseudo-folding lattice network or star-graph topological indices
- Error compensation of tRNA misacylation by codon-anticodon mismatch prevents translational amino acid misinsertion
- In silico analysis of EST and genomic sequences allowed the prediction of cis-regulatory elements for Entamoeba histolytica mRNA polyadenylation
- RNAshapes
- tRNAscan-SE
- GenRGenS
- affypdnn
- Mfold
- UNAFold
- ARTS
- ToMoCoMD-CARDD
- Sfold
- FORESST
- ARWEN
- OligoArray
- RandPS
- Software note: using probe secondary structure information to enhance Affymetrix GeneChip background estimates
- Efficient sampling of RNA secondary structures from the Boltzmann ensemble of low-energy
- Introduction to special issue on RNA
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