ecceTERA
From MaRDI portal
EcceTERA
Cited in
(67)- Aevol
- ReCombinatorics
- Beyond representing orthology relations by trees
- PhySIC
- Notung
- On partial gene transfer and its impact on gene tree reconstruction
- Counting and sampling gene family evolutionary histories in the duplication-loss and duplication-loss-transfer models
- Bioinformatics and phylogenetics. Seminal contributions of Bernard Moret
- Fast algorithm for the reconciliation of gene trees and LGT networks
- DPRml
- pIQPNNI
- Algebraic dynamic programming on trees
- RNAforester
- GRAPPA
- Dendroscope
- ASTRID
- GRIMM
- Mtreemix
- Jane
- FastMe
- UFBoot2
- ExaML
- RAxML-Light
- MOLPHY
- MetaPIGA
- GARLI
- Phylogeny.fr
- OMICtools
- Proteinortho
- GATC
- SuperTriplets
- GIGA
- TreeFix
- L.U.St
- OCTAL
- iGLASS
- NJMerge
- Triplet MaxCut
- FastRFS
- SIESTA
- SVDquest
- MLGO
- ANGES
- ProCARs
- GASTS
- MSOAR
- FISHtrees
- BitPhylogeny
- S-Cluster++
- HyDe
- ALPHA
- StarBEAST2
- MURPAR
- Blast2GO
- i-ADHoRe
- CYNTENATOR
- MCScanX
- STELLS2
- TED
- RAT
- RANGER-DTL
- CompactCH
- TERA
- TRACTION: fast non-parametric improvement of estimated gene trees
- A general framework for gene tree correction based on duplication-loss reconciliation
- TriLoNet
- SaGePhy
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