ecceTERA
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EcceTERA
Cited in
(67)- Beyond representing orthology relations by trees
- Fast algorithm for the reconciliation of gene trees and LGT networks
- TRACTION: fast non-parametric improvement of estimated gene trees
- ReCombinatorics
- PhySIC
- Notung
- DPRml
- pIQPNNI
- RNAforester
- GRAPPA
- ASTRID
- SIESTA
- Dendroscope
- GRIMM
- Mtreemix
- Jane
- FastMe
- ANGES
- ALPHA
- BitPhylogeny
- Blast2GO
- ExaML
- CYNTENATOR
- FastRFS
- GARLI
- GATC
- GIGA
- GASTS
- FISHtrees
- iGLASS
- L.U.St
- HyDe
- i-ADHoRe
- MetaPIGA
- MOLPHY
- MLGO
- OMICtools
- NJMerge
- OCTAL
- MCScanX
- MSOAR
- Phylogeny.fr
- MURPAR
- Proteinortho
- ProCARs
- RAxML-Light
- S-Cluster++
- SuperTriplets
- SVDquest
- UFBoot2
- TreeFix
- Triplet MaxCut
- StarBEAST2
- STELLS2
- RAT
- TED
- CompactCH
- RANGER-DTL
- TERA
- TriLoNet
- On partial gene transfer and its impact on gene tree reconstruction
- A general framework for gene tree correction based on duplication-loss reconciliation
- Bioinformatics and phylogenetics. Seminal contributions of Bernard Moret
- SaGePhy
- Aevol
- Counting and sampling gene family evolutionary histories in the duplication-loss and duplication-loss-transfer models
- Algebraic dynamic programming on trees
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