A general framework for gene tree correction based on duplication-loss reconciliation

DOI10.4230/LIPICS.WABI.2017.8zbMATH Open1443.92128MaRDI QIDQ5111798FDOQ5111798

Authors: Nadia El-Mabrouk, Aïda Ouangraoua 

Publication date: 27 May 2020

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zbMATH Keywords

phylogenysupertreegene tree correctionreconciliationpolytomy

Mathematics Subject Classification ID

Genetics and epigenetics (92D10) Problems related to evolution (92D15)

Cites Work

• The agreement problem for unrooted phylogenetic trees is FPT
• Efficient non-binary gene tree resolution with weighted reconciliation cost

Cited In (7)

• Error detection and correction of gene trees
• Aligning and Labeling Genomes under the Duplication-Loss Model
• Correcting gene trees by leaf insertions: complexity and approximation
• TRACTION: fast non-parametric improvement of estimated gene trees
• TreeSolve: rapid error-correction of microbial gene trees
• Gene Tree Correction by Leaf Removal and Modification: Tractability and Approximability
• Orthology relation and gene tree correction: complexity results

Uses Software

• ecceTERA
• TreeFix

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