Effective stochastic simulation methods for chemical reaction systems
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\(\tau\)-leap methodsbiological systemchemical reaction systemsdiscrete stochastic simulationmultiscale simulation methodsnetworksstochastic differential equationtime delay
Stochastic ordinary differential equations (aspects of stochastic analysis) (60H10) Computational methods for stochastic equations (aspects of stochastic analysis) (60H35) Numerical solutions to stochastic differential and integral equations (65C30) Classical flows, reactions, etc. in chemistry (92E20)
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(23)- Accelerated stochastic simulation algorithm for coupled chemical reactions with delays
- An evaluation of the Gauss-Radau algorithm for the simulation of chemical dynamics
- Modeling reaction noise with a desired accuracy by using the X level approach reaction noise estimator (XARNES) method
- Embracing noise in chemical reaction networks
- An effective stepsize selection procedure for discrete simulation of biochemical reaction systems
- Numerical solution of stochastic models of biochemical kinetics
- Accelerated leap methods for simulating discrete stochastic chemical kinetics
- The modeling and analysis of biochemical reaction systems
- Extending the multi-level method for the simulation of stochastic biological systems
- Numerical Revelation of the Molecular Structure for Reaction Effective Stimulator or Inhibitor by the Method of Hamiltonean Systematization of Chemical Reaction System Kinetic Models
- Tau Leaping Stochastic Simulation Method in P Systems
- Stochastic projective methods for simulating stiff chemical reacting systems
- A review of stochastic and delay simulation approaches in both time and space in computational cell biology
- scientific article; zbMATH DE number 2152901 (Why is no real title available?)
- On modelling chemical reactions by Monte-Carlo method
- IMPLICIT SIMULATION METHODS FOR STOCHASTIC CHEMICAL KINETICS
- Generalized chemical Langevin equation for chemical reaction systems
- Simulating stochasticities in chemical reactions with deterministic delay differential equations
- Stochastic models for chemically reacting systems using polynomial stochastic hybrid systems
- Reversible-equivalent-monomolecular tau: a leaping method for ``small number and stiff stochastic chemical systems
- Stochastic simulation of chemical reactions in spatially complex media
- ``Final all possible steps approach for accelerating stochastic simulation of coupled chemical reactions
- A numerical scheme for optimal transition paths of stochastic chemical kinetic systems
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