Finite element modeling of biomolecular systems in ionic solution
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Cites work
- ``New-version-fast-multipole-method accelerated electrostatic calculations in biomolecular sys\-tems
- A Finite Element Approximation Theory for the Drift Diffusion Semiconductor Model
- A Fourier spectral-discontinuous Galerkin method for time-dependent 3-D Schrödinger-Poisson equations with discontinuous potentials
- A new minimization protocol for solving nonlinear Poisson-Boltzmann mortar finite element equation
- A three-dimensional model of cellular electrical activity
- Accurate evaluation of electrostatics for macromolecules in solution
- Adaptive finite element modeling techniques for the Poisson-Boltzmann equation
- Adaptive numerical treatment of elliptic systems on manifolds
- Asymptotic Expansions of I-V Relations via a Poisson–Nernst–Planck System
- Comparison of the discrete singular convolution algorithm and the Fourier pseudospectral method for solving partial differential equations
- Computation of natural convection in two-dimensional cavities with Chebyshev polynomials
- Consistency of Semiconductor Modeling: An Existence/Stability Analysis for the Stationary Van Roosbroeck System
- Convergent discretizations for the Nernst-Planck-Poisson system
- Exponential time differencing for stiff systems
- Finite element methods and their convergence for elliptic and parabolic interface problems
- Geometric Singular Perturbation Approach to Steady-State Poisson--Nernst--Planck Systems
- scientific article; zbMATH DE number 5669486 (Why is no real title available?)
- scientific article; zbMATH DE number 1229899 (Why is no real title available?)
- Numerical Methods for Semiconductor Device Simulation
- Optimality of Multilevel Preconditioners for Local Mesh Refinement in Three Dimensions
- Poisson-Nernst-Planck equations for simulating biomolecular diffusion-reaction processes. I: Finite element solutions
- Poisson–Nernst–Planck Systems for Ion Channels with Permanent Charges
- Qualitative Properties of Steady-State Poisson--Nernst--Planck Systems: Perturbation and Simulation Study
- Stability and Convergence of the Crank–Nicolson/Adams–Bashforth scheme for the Time‐Dependent Navier–Stokes Equations
- The Debye system: existence and large time behavior of solutions
- The Finite Element Approximation of the Nonlinear Poisson–Boltzmann Equation
Cited in
(10)- Use and comparative assessment of the CVFEM method for Poisson-Boltzmann and Poisson-Nernst-Planck three dimensional simulations of impedimetric nano-biosensors operated in the DC and AC small signal regimes
- A constrained variational model of biomolecular solvation and its numerical implementation
- Model reduction-based initialization methods for solving the Poisson-Nernst-Planck equations in three-dimensional ion channel simulations
- Poisson-Nernst-Planck equations for simulating biomolecular diffusion-reaction processes. I: Finite element solutions
- A parallel finite element solver for biomolecular simulations based on the toolbox PHG
- Parallel adaptive finite element algorithms for solving the coupled electro-diffusion equations
- Finite element model of charge transport across ionic channels
- Adaptive finite element modeling techniques for the Poisson-Boltzmann equation
- Finite volume element method for predicting electrostatics of a biomolecule immersed in an ionic solvent
- Finite element-boundary element methods for dielectric relaxation spectroscopy
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