Computational methods in systems biology. International conference CMSB 2004, Paris, France, May 26--28, 2004. Revised selected papers. (Q1773141)

The articles of this volume will be reviewed individually. The preceding workshop has been reviewed (see Zbl 1015.00031). Indexed articles: \textit{Pozzi, Sergio; Della Vedova, Gianluca; Mauri, Giancarlo}, An explicit upper bound for the approximation ratio of the maximum gene regulatory network problem, 1-8 [Zbl 1088.68606] \textit{Onsum, Matthew D.; Arkin, Adam P.}, Autonomous mobile robot control based on white blood cell chemotaxis, 9-19 [Zbl 1088.93522] \textit{Priami, Corrado; Quaglia, Paola}, Beta binders for biological interactions, 20-33 [Zbl 1088.68646] \textit{Hunt, C. Anthony; Ropella, Glen E. P.; Roberts, Michael S.; Yan, Li}, Biomimetic in silico devices, 34-42 [Zbl 1088.68821] \textit{Bockmayr, A.; Courtois, A.; Eveillard, D.; Vezain, M.}, Building and analysing an integrative model of HIV-1 RNA alternative splicing, 43-57 [Zbl 1088.93501] \textit{Richard, Adrien; Comet, Jean-Paul; Bernot, Gilles}, Graph-based modeling of biological regulatory networks: Introduction of singular states, 58-72 [Zbl 1088.93506] \textit{Chaume, Denys; Giudicelli, Véronique; Combres, Kora; Ginestoux, Chantal; Lefranc, Marie-Paule}, IMGT-choreography: Processing of complex immunogenetics knowledge, 73-84 [Zbl 1088.68830] \textit{Mardare, Radu; Priami, Corrado; Quaglia, Paola; Vagin, Oleksandr}, Model checking biological systems described using ambient calculus, 85-103 [Zbl 1088.68645] \textit{Fanchon, Eric; Corblin, Fabien; Trilling, Laurent; Hermant, Bastien; Gulino, Danielle}, Modeling the molecular network controlling adhesion between human endothelial cells: Inference and simulation using constraint logic programming, 104-118 [Zbl 1088.68819] \textit{Lodhi, Huma; Muggleton, Stephen}, Modelling metabolic pathways using stochastic logic programs-based ensemble methods, 119-133 [Zbl 1088.68823] \textit{Danos, Vincent; Pradalier, Sylvain}, Projective brane calculus, 134-148 [Zbl 1088.68659] \textit{Imoto, Seiya; Higuchi, Tomoyuki; Kim, SunYong; Jeong, Euna; Miyano, Satoru}, Residual bootstrapping and median filtering for robust estimation of gene networks from microarray data, 149-160 [Zbl 1088.68822] \textit{Volz, Dietmar; Eigel, Martin; Athale, Chaitanya; Bastian, Peter; Hermann, Harald; Kappel, Constantin; Eils, Roland}, Spatial modeling and simulation of diffusion in nuclei of living cells, 161-171 [Zbl 1088.68829] \textit{Chabrier-Rivier, Nathalie; Fages, François; Soliman, Sylvain}, The biochemical abstract machine BIOCHAM, 172-191 [Zbl 1088.68817] \textit{Uhrmacher, Adelinde M.; Degenring, Daniela; Lemcke, Jens; Krahmer, Mario}, Towards reusing model components in systems biology, 192-206 [Zbl 1088.68828] \textit{Chiarugi, D.; Curti, M.; Degano, P.; Marangoni, R.}, VICE: A VIrtual CEll, 207-220 [Zbl 1088.68818] \textit{Neme, Antonio; Miramontes, Pedro}, Biological domain identification based in codon usage by means of rule and tree induction, 221-224 [Zbl 1088.68825] \textit{Bošnački, Dragan}, Black box checking for biochemical networks, 225-230 [Zbl 1088.68642] \textit{Soliman, Sylvain; Fages, François}, CMBSlib: A library for comparing formalisms and models of biological systems, 231-235 [Zbl 1088.68827] \textit{Fisher, Jasmin; Harel, David; Hubbard, E. Jane Albert; Piterman, Nir; Stern, Michael J.; Swerdlin, Naamah}, Combining state-based and scenario-based approaches in modeling biological systems, 236-241 [Zbl 1088.93504] \textit{Finney, Andrew}, Developing SBML beyond Level 2: Proposals for development, 242-247 [Zbl 1088.68820] \textit{Bentele, Martin; Eils, Roland}, General stochastic hybrid method for the simulation of chemical reaction processes in cells, 248-251 [Zbl 1088.68816] \textit{Pazos, Florencio; Guijas, David; Gomez, Manuel J.; Trigo, Almudena; de Lorenzo, Victor; Valencia, Alfonso}, The biodegradation network, a new scenario for computational systems biology research, 252-256 [Zbl 1088.68826] \textit{Cardelli, Luca}, Brane calculi. Interactions of biological membranes., 257-278 [Zbl 1088.68657]