Distribution profiles and their dynamic transition in stochastic gene transcription (Q1945857)
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English | Distribution profiles and their dynamic transition in stochastic gene transcription |
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Distribution profiles and their dynamic transition in stochastic gene transcription (English)
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17 April 2013
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The authors express the mass function \(P_m(t)\) of the gene transcription in single cells, as a simple mathematical functions of the rate constants defined in the two-state model. The basic idea is to transform the master equations of \(P_m(t)\) into several special types of second-order ordinary differential equations using the method of characteristics (see for example the book of [\textit{L. C. Evans}, Partial differential equations. 2nd ed. Providence, RI: American Mathematical Society (2010; Zbl 1194.35001)]). In the second section, they derive the exact form of the probability generating function (Theorem 3 and Theorem 4) and express the probability mass function in elementary forms (Theorem 5 from the third section). The main results are given in Theorem 1 and Theorem 2 and their proofs are given in the last section. Also, some numerical examples are given. These results generalize some similar results due to \textit{J. Peccoud} and \textit{B. Ycart} [Theor. Popul. Biol. 48, No. 2, 222--234 (1995; Zbl 0865.92006)], D. T. Gillespie (2007), Tang M. (2008), S. Iyer-Biswas F. Hayot and C. Ayaprakash (2009) or B. Munsky, G. Neuert and A. van Oudenaarden (2012).
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gene transcription
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master equation
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probability mass functions
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generating functions
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bimodal distribution
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distribution profiles
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spectral solutions
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method of characteristics
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