Single-cell RNA-seq count data used in differential expression benchmark study (Q6688537)

From MaRDI portal





Dataset published at Zenodo repository.
Language Label Description Also known as
English
Single-cell RNA-seq count data used in differential expression benchmark study
Dataset published at Zenodo repository.

    Statements

    0 references
    Count matrices and meta data tables fromsimulated and real world immune cell single-cell RNA-seq experiments. All files are in Rds format and can be read byR using readRDS(). 10k_*: These files contain a filtered version of the 10k Human PBMCs, 3 v3.1data published by 10x Genomics blueprint_data.Rds: This file contains the bulk RNA-seqdata downloaded from BLUEPRINT blueprint_immune_comparisons.Rds: Results from running three bulk RNA-seq differential expression methods sim_data*: These files contain the count matrices and meta data tables for the simulated data. Every filecontains a list of 13 replicates.
    0 references
    20 March 2023
    0 references
    0 references
    0 references
    1.0.0
    0 references

    Identifiers

    0 references