Likelihood-Based Estimation of Multidimensional Langevin Models and Its Application to Biomolecular Dynamics
conformationseffective dynamicsexponential estimatorshidden Markov modelshypoelliptic diffusionmaximum-likelihood principlemodel reductionmolecular dynamicsmultidimensional Langevin equationparameter estimation
Hypoelliptic equations (35H10) PDEs in connection with biology, chemistry and other natural sciences (35Q92) Time series analysis of dynamical systems (37M10) Applications of Markov chains and discrete-time Markov processes on general state spaces (social mobility, learning theory, industrial processes, etc.) (60J20) Markov processes: estimation; hidden Markov models (62M05)
- Reduced Stochastic Models for Complex Molecular Systems
- Automated Model Reduction for Complex Systems Exhibiting Metastability
- scientific article; zbMATH DE number 1552589
- Estimation of space-dependent diffusions and potential landscapes from non-equilibrium data
- An iterative procedure for the estimation of drift and diffusion coefficients of langevin processes
- Algorithms for the computation of the matrix logarithm based on the double exponential formula
- Estimation for stochastic damping Hamiltonian systems under partial observation. III: Diffusion term
- Sparse non Gaussian component analysis by semidefinite programming
- scientific article; zbMATH DE number 1552589 (Why is no real title available?)
- Markov chain Monte Carlo for exact inference for diffusions
- Local and global perspectives on diffusion maps in the analysis of molecular systems
- Towards effective dynamics in complex systems by Markov kernel approximation
- An overlook on statistical inference issues for stochastic damping hamiltonian systems under the fluctuation-dissipation condition
- Coarse-graining the cyclic Lotka-Volterra model: SSA and local maximum likelihood estimation
- Efficient Bayesian estimation of the generalized Langevin equation from data
- Reduced Stochastic Models for Complex Molecular Systems
- Estimation of statistics of transitions and Hill relation for Langevin dynamics
- Estimation of space-dependent diffusions and potential landscapes from non-equilibrium data
- \( \mathcal{P} \)-canonical form of the Drazin inverse of matrices, the matrix logarithm, and the principal matrix logarithm
- Polynomial approximations for the matrix logarithm with computation graphs
- Local and nonlocal discrete regularization on weighted graphs for image and mesh processing
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