Multiple loci mapping via model-free variable selection

DOI10.1111/J.1541-0420.2011.01650.XMaRDI QIDQ2893976zbMATH OpenOpenAlexWikidataFDO

Authors Lexin Li, Wei Sun

Publication date 27 June 2012

Published in Biometrics (Search for Journal in Brave)

Full work available at URL http://europepmc.org/articles/pmc3218235

zbMATH Keywords

sliced inverse regressionadaptive Lassogrouped Lassoepistatic interactioniterative adaptive Lassomultivariate group-wise adaptive penalization

Mathematics Subject Classification ID

Linear inference, regression (62J99) Applications of statistics to biology and medical sciences; meta analysis (62P10) Biochemistry, molecular biology (92C40) Genetics and epigenetics (92D10)

Recommendations

• Variable selection in model-based clustering using multilocus genotype data
• Locating multiple interacting quantitative trait loci using robust model selection
• Model selection in irregular problems: Applications to mapping quantitative trait loci
• An integrated hierarchical Bayesian model for multivariate eQTL mapping
• A Simple New Approach to Variable Selection in Regression, with Application to Genetic Fine Mapping
• Joint variable selection and network modeling for detecting eQTLs
• Bayesian variable selection for post-analytic interrogation of susceptibility loci
• Variable selection and dependency networks for genomewide data

Cites work

• scientific article; zbMATH DE number 1220060 (Why is no real title available?)
• scientific article; zbMATH DE number 1850469 (Why is no real title available?)
• scientific article; zbMATH DE number 845714 (Why is no real title available?)
• A geometric interpretation of the permutation \(p\)-value and its application in eQTL studies
• A note on shrinkage sliced inverse regression
• An Efficient Method of Estimating Seemingly Unrelated Regressions and Tests for Aggregation Bias
• Better Subset Regression Using the Nonnegative Garrote
• Dimension Reduction for the Conditionalkth Moment in Regression
• Dimension reduction based on constrained canonical correlation and variable filtering
• Extended Bayesian information criteria for model selection with large model spaces
• Forward regression for ultra-high dimensional variable screening
• Graphics for Regressions With a Binary Response
• Model Selection and Estimation in Regression with Grouped Variables
• Model-Free Variable Selection
• On almost linearity of low dimensional projections from high dimensional data
• On the Non-Negative Garrotte Estimator
• Partial inverse regression
• Regularization and Variable Selection Via the Elastic Net
• Shrinkage Inverse Regression Estimation for Model-Free Variable Selection
• Sliced Inverse Regression for Dimension Reduction
• Sliced Inverse Regression with Regularizations
• Sufficient Dimension Reduction via Inverse Regression
• Testing predictor contributions in sufficient dimension reduction.
• The Adaptive Lasso and Its Oracle Properties
• The Bayesian Lasso
• The Dantzig selector: statistical estimation when \(p\) is much larger than \(n\). (With discussions and rejoinder).
• Using intraslice covariances for improved estimation of the central subspace in regression
• Variable Selection via Nonconcave Penalized Likelihood and its Oracle Properties

Cited in

(6)

• Comparison between the SSVS and the LASSO for genome wide association studies
• The SgenoLasso and its cousins for selective genotyping and extreme sampling: application to association studies and genomic selection
• Model selection in irregular problems: Applications to mapping quantitative trait loci
• Bayesian variable selection regression for genome-wide association studies and other large-scale problems
• Model free estimation of graphical model using gene expression data
• VCSEL: prioritizing SNP-set by penalized variance component selection

Describes a project that uses

Uses Software

• R/qtl

This page was built for publication: Multiple loci mapping via model-free variable selection

Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q2893976)