Nonparametric multiple change-point estimation for analyzing large Hi-C data matrices

DOI10.1016/J.JMVA.2017.12.005MaRDI QIDQ111617zbMATH OpenOpenAlexFDO

Authors Vincent Brault, Sarah Ouadah, Laure Sansonnet, Céline Lévy-Leduc, Vincent Brault, Sarah Ouadah, Laure Sansonnet, Céline Lévy-Leduc

Publication date May 2018

Published in Journal of Multivariate Analysis (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/j.jmva.2017.12.005

zbMATH Keywords

nonparametric estimationHi-C datamultiple change-point estimation

Mathematics Subject Classification ID

Nonparametric hypothesis testing (62G10) Asymptotic properties of nonparametric inference (62G20) Multivariate distribution of statistics (62H10) Estimation in multivariate analysis (62H12) Hypothesis testing in multivariate analysis (62H15)

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Cites work

• scientific article; zbMATH DE number 432498 (Why is no real title available?)
• scientific article; zbMATH DE number 3551712 (Why is no real title available?)
• A nonparametric approach for multiple change point analysis of multivariate data
• A novel approach to detection of intrusions in computer networks via adaptive sequential and batch-sequential change-point detection methods
• Asymptotic Statistics
• Change-point detection in panel data
• Comparing segmentation methods for genome annotation based on RNA-seq data
• Detection and localization of change-points in high-dimensional network traffic data
• Detection of abrupt changes: theory and application
• Estimating the number of block boundaries from diagonal blockwise matrices without penalization
• Hierarchical clustering via joint between-within distances: extending Ward's minimum variance method
• Homogeneity and change-point detection tests for multivariate data using rank statistics
• Multiple-Change-Point Detection for High Dimensional Time Series via Sparsified Binary Segmentation
• On the approximation of curves by line segments using dynamic programming
• Optimal detection of changepoints with a linear computational cost
• Slope heuristics: overview and implementation
• Uniform change point tests in high dimension

Cited in

(7)

• A robust bootstrap change point test for high-dimensional location parameter
• Latent rank change detection for analysis of splice-junction microarrays with nonlinear effects
• Estimating the number of block boundaries from diagonal blockwise matrices without penalization
• Change-point model on nonhomogeneous Poisson processes with application in copy number profiling by next-generation DNA sequencing
• MuChPoint
• Mixture of segmentation for heterogeneous functional data
• Simultaneous multiple change-point and factor analysis for high-dimensional time series

Describes a project that uses

Uses Software

• CAPUSHE

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