Takuyo Aita

MaRDI QIDQ196584zbMATH OpenFDO

List of research outcomes

This list is not complete and representing at the moment only items from zbMATH Open and arXiv. We are working on additional sources - please check back here soon!

Publication	Date of Publication	Type
Mathematical consideration of massive estimation of dissociation rate constant for genotype-phenotype linking molecules bound to targets through washing/selection and next-generation sequencing Journal of Theoretical Biology	2025-01-24	Paper
Extracting characteristic properties of fitness landscape from \textit{in vitro} molecular evolution: a case study on infectivity of fd phage to \textit{E. coli} Journal of Theoretical Biology	2020-11-05	Paper
An \textit{in silico} exploration of the neutral network in protein sequence space Journal of Theoretical Biology	2020-05-06	Paper
Thermodynamical interpretation of an adaptive walk on a Mt. Fuji-type fitness landscape: Einstein relation-like formula holds in a stochastic evolution Journal of Theoretical Biology	2020-05-06	Paper
Statistical formulae of the energy distribution among a globular protein structure ensemble Journal of Theoretical Biology	2020-05-06	Paper
Toward the fast blind docking of a peptide to a target protein by using a four-body statistical pseudo-potential Computational Biology and Chemistry	2018-12-05	Paper
Hierarchical distribution of ascending slopes, nearly neutral networks, highlands, and local optima at the \(d\)th order in an NK fitness landscape Journal of Theoretical Biology	2018-10-22	Paper
Fitting protein-folding free energy landscape for a certain conformation to an NK fitness landscape Journal of Theoretical Biology	2018-10-16	Paper
Biophysical connection between evolutionary dynamics and thermodynamics in \textit{in vitro} evolution Journal of Theoretical Biology	2018-09-26	Paper
Toward an evolutionary containment of evolving pathogen-receptors by using an ensemble of multiple mutant ligands: from the viewpoint of fitness landscape in sequence space Journal of Theoretical Biology	2018-09-26	Paper
Inference of fitness values and putative appearance time points for evolvable self-replicating molecules from time series of occurrence frequencies in an evolution reactor Journal of Theoretical Biology	2016-09-05	Paper
Evolutionary dynamics of a polymorphic self-replicator population with a finite population size and hyper mutation rate Journal of Theoretical Biology	2016-08-18	Paper
Thermodynamical interpretation of evolutionary dynamics on a fitness landscape in an evolution reactor. II Bulletin of Mathematical Biology	2016-04-05	Paper
Thermodynamical interpretation of evolutionary dynamics on a fitness landscape in a evolution reactor. I Bulletin of Mathematical Biology	2016-03-08	Paper
Estimation of statistical binding properties of ligand population during in vitro selection based on population dynamics theory Mathematical Biosciences	2014-03-25	Paper
Theoretical consideration of selective enrichment in in vitro selection: optimal concentration of target molecules Mathematical Biosciences	2012-12-28	Paper
Adaptive walks by the fittest among finite random mutants on a Mt. Fuji-type fitness landscape. II: Effect of small non-additivity Journal of Mathematical Biology	2001-08-09	Paper

Research outcomes over time

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