Phyloseq
From MaRDI portal
Cited in
(42)- DESMAN
- SummarizedExperiment
- DESeq2
- Rare feature selection in high dimensions
- Statistical analysis of microbiome data with R
- vegan
- edgeR
- multtest
- A statistical perspective on the challenges in molecular microbial biology
- GUniFrac
- Mutoss
- Voom
- propr
- mplot
- NBC
- VennDiagram
- d3Network
- taxize
- Interactive Visualization of Hierarchically Structured Data
- qvalue
- mothur
- structSSI
- UrQt
- pplacer
- MDSINE
- MicrobiomeAnalyst
- betapart
- NeatMap
- MultiCluster
- SingleCellExperiment
- USEARCH
- UPARSE
- DivNet
- ggtree
- ggbio
- microbiome
- rare
- treeio
- DADA2
- trackr
- Modeling microbial abundances and dysbiosis with beta-binomial regression
- Bayesian nonparametric inference for shared species richness in multiple populations
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