Elastic model of looped DNA

DOI10.1016/0167-2789(86)90002-3zbMATH Open0607.92011OpenAlexW2037341542MaRDI QIDQ1086191FDOQ1086191

Authors: Miki Wadati, Hideo Tsuru 

Publication date: 1986

Published in: Physica D (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/0167-2789(86)90002-3

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zbMATH Keywords

elastic energylinking numbertwisting numbernucleotidesbiochemistryequilibrium positions8-shaped configurationcircular configurationcircular forms of DNAloop of DNAminimal elastic energyright-handed double helixsupercoiling phenomenawrithing number

Mathematics Subject Classification ID

Curves in Euclidean and related spaces (53A04) Saint-Venant's principle (74G50) Physiological, cellular and medical topics (92Cxx)

Cites Work

• Title not available (Why is that?)
• The Writhing Number of a Space Curve

Cited In (22)

• Topologically non-linked circular duplex DNA
• Infinitesimal bending of DNA helices
• Geometric effects of cross sections on equilibrium of helical and twisted ribbon
• Instability of a quantum vortex by twist perturbation
• An analytical method to connect open curves for modeling protein-bound DNA minicircles
• The first and second variation of the total energy of closed duplex DNA in planar case
• A two-strand ply hanging under its own weight
• Geometrical equilibrium of curves: a showcase of helical numerical solutions
• Euler-Lagrange equations for DNA chain by an elastic rod model
• Title not available (Why is that?)
• The dynamics of stretchable rods in the inertial case
• WRITHING AND LINKING DENSITIES FOR CLOSED, CIRCULAR DNA
• A new solution of the equilibrium equations of a system of bodies with elastic joints
• Some notes on low-dimensional elastic theories of bio- and nano-structures
• Single-molecule magnetic tweezer tests on DNA: bounds on topoisomerase relaxation
• Finite-element analysis of the displacement of closed DNA loops under torsional stress
• On solutions to Euler-Lagrange equations governing isotropic, homogeneous, naturally curved Kirchhoff's elastic rods
• Multiple folding and packing in DNA modeling
• Loop exponent in DNA bubble dynamics
• Nonlinear dynamics of filaments. I: Dynamical instabilities
• Helical repeat and linking number of surface-wrapped DNA
• An algebro-geometric model for the shape of supercoiled DNA

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